Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC139712.2-201ENST00000424302 339 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL356583.2-201ENST00000426536 280 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL135790.2-201ENST00000437701 267 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL121601.2-201ENST00000438019 707 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 HSPE1P9-201ENST00000440046 311 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 GAPDHP17-201ENST00000449858 1001 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 SNRPFP4-201ENST00000456366 242 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 RPL31P3-201ENST00000458430 332 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 RPL9P9-202ENST00000466501 579 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 MTCYBP18-201ENST00000501056 747 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AC079140.2-201ENST00000506193 142 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 TRMT112P2-201ENST00000512910 132 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 SCARNA24.1-201ENST00000516465 137 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 MIR3923-201ENST00000579521 83 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AC090578.1-201ENST00000604955 591 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL157834.3-201ENST00000615543 103 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 AL078595.3-201ENST00000623815 1166 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.9□□□□□ -2.26
UPK3BQ9BT76 MTND5P17-201ENST00000418405 1603 ntBASIC0.9□□□□□ -2.26
UPK3BQ9BT76 AC100821.1-201ENST00000523153 2479 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 RNU6-1287P-201ENST00000362914 107 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.327-201ENST00000365201 102 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 RNU6-169P-201ENST00000365336 107 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 RNU6-1060P-201ENST00000384664 107 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 MTCYBP2-201ENST00000407745 171 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 RNU2-41P-201ENST00000410991 178 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AC078809.1-201ENST00000427601 140 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 C8orf59P1-201ENST00000429930 303 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 SNORA3.4-201ENST00000515969 96 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 RN7SKP179-201ENST00000516126 217 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AC005668.1-201ENST00000571142 476 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 BNIP3P16-201ENST00000589779 534 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AC008751.2-201ENST00000597885 980 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 Z99289.3-201ENST00000605586 594 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 AL050343.2-201ENST00000607338 280 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 MIR6078-201ENST00000611069 100 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 MIR7844-201ENST00000616161 122 ntBASIC0.9□□□□□ -2.27
UPK3BQ9BT76 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
UPK3BQ9BT76 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 MTND4P14-201ENST00000435799 1354 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 U3.4-201ENST00000363352 213 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.255-201ENST00000364581 97 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 RNU6-692P-201ENST00000384496 107 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.598-201ENST00000410480 95 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 MTND1P30-201ENST00000441241 901 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 MTND3P3-201ENST00000505004 126 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC079140.3-201ENST00000511111 550 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 RNU6-1178P-201ENST00000516674 107 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 SNORD60.2-201ENST00000516883 86 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 RNU6-1220P-201ENST00000517126 108 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC107304.1-201ENST00000604229 296 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AL356157.2-201ENST00000605122 111 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC009159.2-201ENST00000617603 606 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC099654.13-201ENST00000639774 207 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AL159152.1-201ENST00000635019 2587 ntBASIC0.89□□□□□ -2.27
UPK3BQ9BT76 AC010615.1-201ENST00000594254 1764 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 MIR340-201ENST00000362125 95 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.4-201ENST00000362333 112 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 U3.9-201ENST00000363823 204 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 SNORA32.2-201ENST00000384049 122 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 RNU6-550P-201ENST00000391057 101 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 UBE2D3P4-201ENST00000441973 436 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 RNU7-14P-201ENST00000459331 62 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC004223.1-201ENST00000479840 271 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 ATP5EP1-201ENST00000510257 156 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 Vault.3-201ENST00000516676 95 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 SNORA31.16-201ENST00000516773 139 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 RNA5SP481-201ENST00000516814 122 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms