Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 AL078605.1-201ENST00000603529 500 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 AL359854.1-201ENST00000614203 1594 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 MIR490-201ENST00000384865 128 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 RN7SKP177-201ENST00000410567 355 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 RN7SKP53-201ENST00000411337 315 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 AP000705.1-201ENST00000454567 350 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-581P-201ENST00000516214 105 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 AP004242.1-201ENST00000533701 349 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 MIR3144-201ENST00000579460 79 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 MIR3690-201ENST00000580266 75 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 AC068831.7-201ENST00000616954 363 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 ADAM3A-203ENST00000461344 2157 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 ZNF204P-201ENST00000416749 2397 ntBASIC4.17□□□□□ -1.74
ZKSCAN3Q9BRR0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 AC110491.1-201ENST00000562191 2010 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.217-201ENST00000364214 105 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.262-201ENST00000364641 102 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-283P-201ENST00000364788 107 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.308-201ENST00000365043 101 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 MIR218-2-201ENST00000385006 110 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-394P-201ENST00000410735 107 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 CYCSP4-201ENST00000429682 331 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 FTH1P6-201ENST00000430768 320 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 SNORD105B-201ENST00000458770 79 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-625P-201ENST00000459412 107 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.641-201ENST00000459414 105 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 AC090897.2-201ENST00000581715 130 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 AC025946.2-201ENST00000603398 234 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 AC004825.2-201ENST00000616634 455 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 MAPK10-372ENST00000641954 3413 ntBASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZKSCAN3Q9BRR0 MTND5P35-201ENST00000557537 1720 ntBASIC4.15□□□□□ -1.74
ZKSCAN3Q9BRR0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ZKSCAN3Q9BRR0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-804P-201ENST00000384286 107 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 BPY2DP-201ENST00000422208 265 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 YME1L1P1-201ENST00000429435 297 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 U3.44-201ENST00000458938 192 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 RPS29P20-201ENST00000489592 171 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 AC115990.1-201ENST00000526957 301 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 AC021739.1-201ENST00000559631 174 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 AP001485.1-201ENST00000604799 199 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 AC005828.6-201ENST00000606610 232 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 BX322639.1-202ENST00000423987 2213 ntBASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ZKSCAN3Q9BRR0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU4-35P-201ENST00000362588 141 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-622P-201ENST00000384272 103 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR449B-201ENST00000384995 97 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 U3.39-201ENST00000408569 239 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AL358232.1-201ENST00000448030 501 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AC007215.1-201ENST00000464893 276 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RPL30P12-201ENST00000474666 353 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RN7SL293P-201ENST00000481765 281 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-346P-201ENST00000516288 111 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RNY3P16-201ENST00000516338 101 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms