Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 OR56A5-201ENST00000340110 738 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 SNORD50.1-201ENST00000362987 71 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 RNU4-56P-201ENST00000364700 142 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 RNU6-1040P-201ENST00000383974 107 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 SNORA41-201ENST00000384675 132 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AC078809.1-201ENST00000427601 140 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AC007677.1-201ENST00000445757 515 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AL513124.1-201ENST00000450410 614 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AC091179.1-201ENST00000461606 579 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 RNU6-470P-201ENST00000515954 104 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AC109329.1-201ENST00000518744 317 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 AL080274.1-201ENST00000605565 220 ntBASIC2.84□□□□□ -1.95
PAAF1Q9BRP4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
PAAF1Q9BRP4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PAAF1Q9BRP4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.96
PAAF1Q9BRP4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PAAF1Q9BRP4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC092268.1-201ENST00000342691 405 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 RNY1P16-201ENST00000363063 111 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 RNU6-486P-201ENST00000363116 107 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 RNU6-529P-201ENST00000363383 104 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.445-201ENST00000384168 102 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 RNU1-57P-201ENST00000384491 166 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL512633.1-201ENST00000399931 655 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR1302-11-201ENST00000408051 138 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR1302-9-201ENST00000408365 138 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR1302-10-201ENST00000408734 138 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL590135.1-201ENST00000422215 156 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC019205.3-201ENST00000424573 156 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 RPL23AP95-201ENST00000426806 265 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC011816.1-201ENST00000441346 546 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC016700.2-201ENST00000446011 156 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC015911.1-201ENST00000495111 156 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC022447.4-201ENST00000504053 364 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MRPS36P4-201ENST00000534436 298 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC079598.5-201ENST00000547460 117 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC103810.1-201ENST00000579873 453 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR3605-201ENST00000583214 100 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR4635-201ENST00000583759 79 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR4719-201ENST00000585233 84 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL158827.2-201ENST00000602494 330 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MIR1302-2-201ENST00000607096 138 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL691447.3-201ENST00000635020 330 ntBASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.83□□□□□ -1.96
PAAF1Q9BRP4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RNU6-1286P-201ENST00000383871 107 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.394-201ENST00000383942 103 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 MIR186-201ENST00000384988 86 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RNU6-700P-201ENST00000391043 107 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RN7SKP61-201ENST00000410642 295 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RPL17P19-201ENST00000489069 552 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 SRIP1-201ENST00000489235 288 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 AC021146.2-201ENST00000504736 556 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.661-201ENST00000516003 99 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 RNU6-120P-201ENST00000516077 103 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 AC021231.3-201ENST00000558497 370 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 MIR5696-201ENST00000578474 85 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 AL670379.2-201ENST00000604983 252 ntBASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.82□□□□□ -1.96
PAAF1Q9BRP4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 RNU6-655P-201ENST00000362858 107 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 RNU6-490P-201ENST00000362985 107 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.197-201ENST00000364004 102 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 SNORA67.4-201ENST00000384688 142 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 RNA5SP494-201ENST00000410653 129 ntBASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.81□□□□□ -1.96
PAAF1Q9BRP4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms