Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 CBX3P6-201ENST00000430257 527 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC244670.1-201ENST00000436879 112 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CITED1Q99966 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.75□□□□□ -2.13
CITED1Q99966 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.75□□□□□ -2.13
CITED1Q99966 AC016700.2-201ENST00000446011 156 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.75□□□□□ -2.13
CITED1Q99966 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.75□□□□□ -2.13
CITED1Q99966 TPTE2P5-203ENST00000458118 728 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 RNU6-261P-201ENST00000459506 102 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC087884.1-201ENST00000469738 328 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC083798.1-201ENST00000472671 131 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC015911.1-201ENST00000495111 156 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC022447.4-201ENST00000504053 364 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 CCDC34P1-201ENST00000507441 517 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.75□□□□□ -2.13
CITED1Q99966 AC104383.1-201ENST00000530297 370 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
CITED1Q99966 HSPE1P4-201ENST00000550617 308 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC007375.1-201ENST00000554513 578 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 VN1R80P-201ENST00000597126 338 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 VN1R107P-201ENST00000601784 209 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC048344.4-201ENST00000619744 527 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AC124864.2-201ENST00000624736 186 ntBASIC1.75□□□□□ -2.13
CITED1Q99966 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.75□□□□□ -2.13
CITED1Q99966 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CITED1Q99966 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CITED1Q99966 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.74□□□□□ -2.13
CITED1Q99966 RNA5SP37-201ENST00000365420 130 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 OR5H15-201ENST00000383696 930 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 SNORA69-201ENST00000383895 132 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 Y_RNA.559-201ENST00000384686 107 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 MIR221-201ENST00000385135 110 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CITED1Q99966 MTCO3P40-201ENST00000392516 676 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 SNORA11.4-201ENST00000408823 129 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CITED1Q99966 RPS15AP28-201ENST00000435088 386 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 IFNA20P-201ENST00000436840 528 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 AC018634.1-201ENST00000437554 401 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
CITED1Q99966 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.74□□□□□ -2.13
CITED1Q99966 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.74□□□□□ -2.13
CITED1Q99966 PRELID3BP1-201ENST00000457142 540 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.74□□□□□ -2.13
CITED1Q99966 RNU7-138P-201ENST00000459479 64 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.74□□□□□ -2.13
CITED1Q99966 AC009646.1-201ENST00000510455 318 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 SNORA14.1-201ENST00000516113 141 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 RNU6-189P-201ENST00000516120 101 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 RNU6-1038P-201ENST00000516516 104 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.74□□□□□ -2.13
CITED1Q99966 AC024909.2-201ENST00000553035 286 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 AC090115.3-201ENST00000553218 849 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 TRAV32-201ENST00000553993 340 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 OR11H5P-201ENST00000554039 926 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 MIR3136-201ENST00000583498 78 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 AC018889.1-201ENST00000605372 397 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 AC009318.2-201ENST00000610917 651 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 AP000553.5-201ENST00000641933 54 ntBASIC1.74□□□□□ -2.13
CITED1Q99966 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.74□□□□□ -2.13
CITED1Q99966 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CITED1Q99966 AL356292.1-201ENST00000283110 373 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CITED1Q99966 RNU6-142P-201ENST00000384019 107 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 MIR1294-201ENST00000408503 142 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 RNU2-16P-201ENST00000410712 136 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 POLHP1-201ENST00000411806 470 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.73□□□□□ -2.13
CITED1Q99966 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.73□□□□□ -2.13
CITED1Q99966 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.73□□□□□ -2.13
CITED1Q99966 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 AC145146.1-201ENST00000496370 254 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 HMGB3P17-201ENST00000504195 649 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.73□□□□□ -2.13
CITED1Q99966 RNA5SP364-201ENST00000516938 78 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.73□□□□□ -2.13
CITED1Q99966 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.73□□□□□ -2.13
CITED1Q99966 MIR4424-201ENST00000585257 86 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.73□□□□□ -2.13
CITED1Q99966 AC092747.3-201ENST00000603769 301 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 AL356157.2-201ENST00000605122 111 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 AC103591.3-201ENST00000608684 209 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 MIR6132-201ENST00000622083 109 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 MIR6766-201ENST00000622641 72 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
CITED1Q99966 AP000560.1-201ENST00000624150 1937 ntBASIC1.73□□□□□ -2.13
CITED1Q99966 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 RNU4-15P-201ENST00000362613 141 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 RNU1-51P-201ENST00000365345 176 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms