Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 Y_RNA.111-201ENST00000363248 100 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 SNORA5B-201ENST00000363786 132 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 MIR27B-201ENST00000385129 97 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 MIR1277-201ENST00000408536 78 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 RNU2-52P-201ENST00000410680 190 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 RNU2-48P-201ENST00000410694 191 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 RNU6-325P-201ENST00000411132 105 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 VN1R36P-201ENST00000414936 291 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 EIF1P1-201ENST00000421436 341 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC063976.3-201ENST00000426849 329 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 CBX3P6-201ENST00000430257 527 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 MTCO3P18-201ENST00000440206 761 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 MTCO1P29-201ENST00000496868 288 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC114801.2-201ENST00000503825 781 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC078795.3-201ENST00000602913 472 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC080078.2-201ENST00000603766 501 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 AL162373.1-201ENST00000620433 407 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 AC100810.6-201ENST00000638068 285 ntBASIC1.94□□□□□ -2.1
RAB40CQ96S21 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RAB40CQ96S21 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40CQ96S21 Y_RNA.414-201ENST00000384011 101 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 RNU6-933P-201ENST00000384424 107 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AL030996.1-201ENST00000411430 235 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC009161.1-201ENST00000417306 376 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 RPS29P27-201ENST00000463711 170 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 RPS29P25-201ENST00000481709 171 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC104564.1-201ENST00000493028 407 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC021231.3-201ENST00000558497 370 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 MIR4287-201ENST00000579398 78 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40CQ96S21 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 AC092608.2-201ENST00000624427 218 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
RAB40CQ96S21 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40CQ96S21 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40CQ96S21 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RAB40CQ96S21 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40CQ96S21 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40CQ96S21 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40CQ96S21 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40CQ96S21 ZNF720P1-201ENST00000562403 1939 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 Y_RNA.157-201ENST00000363638 102 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 SNORA36A-201ENST00000384221 132 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 RNU6-611P-201ENST00000384276 104 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 MIR196B-201ENST00000384852 84 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 MIR518A2-201ENST00000384966 87 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 SNORA12-201ENST00000391162 147 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40CQ96S21 ZNF885P-201ENST00000420174 1098 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 ARL5AP4-201ENST00000430731 512 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 AC245102.2-201ENST00000448956 180 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 AC096745.1-201ENST00000509945 370 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 RNU6-567P-201ENST00000516746 107 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 RNU6-256P-201ENST00000516747 97 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 MIR3923-201ENST00000579521 83 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 AC146944.4-201ENST00000602697 718 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 Z98751.3-201ENST00000604447 521 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 AC007014.2-201ENST00000615581 479 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 AL132822.1-201ENST00000617063 513 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 AL450472.1-202ENST00000637286 180 ntBASIC1.92□□□□□ -2.1
RAB40CQ96S21 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40CQ96S21 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
RAB40CQ96S21 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAB40CQ96S21 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40CQ96S21 RNU6-743P-201ENST00000364151 106 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 Y_RNA.505-201ENST00000384489 102 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 MIR29C-201ENST00000385231 88 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 MTCYBP2-201ENST00000407745 171 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 MIR1294-201ENST00000408503 142 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 RNA5SP184-201ENST00000411071 108 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms