Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AC103851.1-201ENST00000506833 274 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 MIR548S-201ENST00000581352 82 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 SNORA63.1-201ENST00000362493 131 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 SNORA71.3-201ENST00000362582 128 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 SNORA72.1-201ENST00000363485 129 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 SNORA46.1-201ENST00000391069 153 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 MIR208B-201ENST00000401172 77 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AL591034.2-201ENST00000402839 359 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 RNU2-32P-201ENST00000411193 191 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 EIF4EP2-201ENST00000422816 654 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AL513124.1-201ENST00000450410 614 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.47□□□□□ -2.01
NR1H4Q96RI1 RPL7P49-201ENST00000471402 708 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AC021146.2-201ENST00000504736 556 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 HMGB3P3-201ENST00000510526 400 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AL121579.1-201ENST00000555129 305 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 MIR5694-201ENST00000581190 76 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AC243960.4-201ENST00000600532 288 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 7SK.7-201ENST00000603504 247 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 MIR203B-201ENST00000636080 86 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 TPTEP1-208ENST00000636884 213 ntBASIC2.47□□□□□ -2.01
NR1H4Q96RI1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
NR1H4Q96RI1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.46□□□□□ -2.01
NR1H4Q96RI1 RNU1-23P-201ENST00000363361 144 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 U3.9-201ENST00000363823 204 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 SNORD81.2-201ENST00000365153 76 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 SNORA29-201ENST00000384183 140 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 SNORA36A-201ENST00000384221 132 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 MTCYBP2-201ENST00000407745 171 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 MIR1294-201ENST00000408503 142 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.46□□□□□ -2.02
NR1H4Q96RI1 RN7SL807P-201ENST00000470923 297 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AC132942.1-201ENST00000486753 483 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 HMGN1P12-201ENST00000499125 195 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.46□□□□□ -2.02
NR1H4Q96RI1 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AC018630.3-201ENST00000542637 96 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 MIR3944-201ENST00000581277 108 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 MIR4444-1-201ENST00000581696 74 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 MIR4444-2-201ENST00000584390 74 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 UBE2V2P2-201ENST00000587677 504 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AL078605.1-201ENST00000603529 500 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AL355073.2-201ENST00000612106 557 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AC137590.2-201ENST00000619709 240 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AC099654.5-201ENST00000636479 350 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 AL450472.1-202ENST00000637286 180 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 MTND5P9-201ENST00000503854 1755 ntBASIC2.46□□□□□ -2.02
NR1H4Q96RI1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.88-201ENST00000363029 99 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 RNU6-944P-201ENST00000364023 107 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 SNORA25B-201ENST00000365507 128 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 SNORA54-201ENST00000384281 123 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 RNU6-601P-201ENST00000384540 107 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 PDCL2P1-201ENST00000419302 352 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AL139109.1-201ENST00000455491 297 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 BX510359.1-201ENST00000456973 237 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AC022616.8-201ENST00000533569 253 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 MIR5004-201ENST00000579078 107 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.45□□□□□ -2.02
NR1H4Q96RI1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
NR1H4Q96RI1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.184-201ENST00000363884 108 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 RNU6-596P-201ENST00000365395 98 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 RNU6-851P-201ENST00000384565 107 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 RNA5SP201-201ENST00000410316 124 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 USP9YP30-201ENST00000430729 455 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms