Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 MTND3P5-201ENST00000512798 333 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 MTCO3P28-201ENST00000513351 515 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 COPS8P3-201ENST00000526024 482 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AL356057.1-201ENST00000533798 831 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AC008752.3-201ENST00000588113 712 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 BNIP3P16-201ENST00000589779 534 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AL590229.1-201ENST00000603497 542 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AL034555.1-201ENST00000604816 211 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AC005858.4-201ENST00000623191 700 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AC022418.1-201ENST00000624118 445 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 AC008993.2-201ENST00000631744 806 ntBASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
PKNOX2Q96KN3 RNU6-282P-201ENST00000365357 103 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 RNU6-393P-201ENST00000384475 107 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 MIR1285-1-201ENST00000408593 84 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 BX295541.1-201ENST00000417774 250 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 AC013470.1-201ENST00000453438 462 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 AC022364.2-201ENST00000457963 554 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 RNU6-333P-201ENST00000459117 107 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 MTCO2P6-201ENST00000463134 685 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 HMGN1P13-201ENST00000505795 138 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 MIR4703-201ENST00000577728 79 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 AP000654.2-201ENST00000605633 586 ntBASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PKNOX2Q96KN3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 RNU6-336P-201ENST00000364891 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 SNORA22-201ENST00000383907 134 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 RNU6-142P-201ENST00000384019 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 RNU6-43P-201ENST00000384302 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 RNU6-434P-201ENST00000384376 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 RNU6-456P-201ENST00000384493 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 RNU6-160P-201ENST00000384591 107 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 SNORA22C-201ENST00000384614 134 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 PIGFP2-201ENST00000421400 651 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC133104.1-201ENST00000429100 218 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 MTND1P18-201ENST00000448191 573 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 GMFBP1-201ENST00000467831 427 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 YWHAEP4-201ENST00000505390 198 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 MIR3136-201ENST00000583498 78 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 NIFKP6-201ENST00000598115 845 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 VN1R107P-201ENST00000601784 209 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AC087683.2-201ENST00000611384 326 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 MIR6845-201ENST00000613182 61 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 SNORD98-201ENST00000636377 67 ntBASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
PKNOX2Q96KN3 AL391516.1-201ENST00000554380 2449 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU6-428P-201ENST00000362942 107 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU6-692P-201ENST00000384496 107 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 SNORD70.1-201ENST00000391007 85 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AL357139.1-201ENST00000407792 426 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 PRPS1P1-201ENST00000445305 876 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AL513124.1-201ENST00000450410 614 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC079382.1-201ENST00000493346 557 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC145146.1-201ENST00000496370 254 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU2-69P-201ENST00000516061 100 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU7-40P-201ENST00000516397 64 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 Z94722.1-201ENST00000604328 474 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC091931.1-201ENST00000623488 728 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 AC009161.2-201ENST00000624626 138 ntBASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PKNOX2Q96KN3 RNU6-181P-201ENST00000363225 107 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 RNU6-23P-201ENST00000363283 107 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 U3.4-201ENST00000363352 213 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 RNA5SP493-201ENST00000364115 91 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 RNU6-606P-201ENST00000384721 111 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 SNORA16.2-201ENST00000390991 127 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 SNORA12-201ENST00000391162 147 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 RPS29P13-201ENST00000402041 169 ntBASIC1.46□□□□□ -2.18
PKNOX2Q96KN3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms