Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 RNU1-148P-201ENST00000384472 162 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 SNORA12-201ENST00000391162 147 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 GPM6BP3-201ENST00000442797 145 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC145146.1-201ENST00000496370 254 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 MTCO2P30-201ENST00000503662 364 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC016632.1-201ENST00000503994 196 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 RNU6-965P-201ENST00000516721 96 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 CPDP1-201ENST00000579660 283 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AL356157.2-201ENST00000605122 111 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC018889.1-201ENST00000605372 397 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AP000560.1-201ENST00000624150 1937 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 CASC19-280ENST00000642102 1351 ntBASIC3.11□□□□□ -1.91
CCDC136Q96JN2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC136Q96JN2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC136Q96JN2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 SNORA5B-201ENST00000363786 132 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 RNU1-91P-201ENST00000364746 163 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 SNORD116-11-201ENST00000383882 92 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 RNU6-933P-201ENST00000384424 107 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 MIR29B2-201ENST00000385055 81 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AL360182.1-201ENST00000397433 468 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 Y_RNA.597-201ENST00000410463 100 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC078809.1-201ENST00000427601 140 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 Z82205.1-201ENST00000428456 297 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC009238.1-201ENST00000442165 424 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC009237.6-201ENST00000446969 424 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC136Q96JN2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC096725.1-201ENST00000514266 313 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 SNORA4.4-201ENST00000515921 135 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 RN7SKP256-201ENST00000517201 314 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC026464.5-201ENST00000562497 722 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AL133215.3-201ENST00000609801 448 ntBASIC3.1□□□□□ -1.91
CCDC136Q96JN2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC136Q96JN2 AC007336.1-201ENST00000576365 3828 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC069528.2-201ENST00000624849 1991 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC092268.1-201ENST00000342691 405 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 RNU6-790P-201ENST00000384479 105 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 SNORA26.3-201ENST00000391119 136 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 RN7SKP158-201ENST00000410453 326 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 RNU2-32P-201ENST00000411193 191 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC022447.4-201ENST00000504053 364 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC136Q96JN2 RNA5SP356-201ENST00000515972 94 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC136Q96JN2 RPS3AP23-202ENST00000574601 686 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 MIR3136-201ENST00000583498 78 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC022202.1-201ENST00000613515 211 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 AC012640.5-201ENST00000623897 319 ntBASIC3.09□□□□□ -1.91
CCDC136Q96JN2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC136Q96JN2 ZNF720P1-201ENST00000562403 1939 ntBASIC3.09□□□□□ -1.92
CCDC136Q96JN2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 SNORA3A-201ENST00000364113 130 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 SNORA25B-201ENST00000365507 128 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 RNU6-142P-201ENST00000384019 107 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 MIR561-201ENST00000385216 97 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 HMGN2P38-201ENST00000423806 265 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AL645568.3-201ENST00000433683 316 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 MTND4LP16-201ENST00000440828 295 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AC104564.1-201ENST00000493028 407 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AP005639.2-201ENST00000527592 928 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 MIR4742-201ENST00000581069 85 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 Z98751.3-201ENST00000604447 521 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 AL133216.2-202ENST00000634512 349 ntBASIC3.08□□□□□ -1.92
CCDC136Q96JN2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC136Q96JN2 RNU6-306P-201ENST00000384617 107 ntBASIC3.07□□□□□ -1.92
CCDC136Q96JN2 MIR517A-201ENST00000385001 87 ntBASIC3.07□□□□□ -1.92
CCDC136Q96JN2 SNORA46.1-201ENST00000391069 153 ntBASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AL590556.1-201ENST00000423231 483 ntBASIC3.07□□□□□ -1.92
CCDC136Q96JN2 IFNA20P-201ENST00000436840 528 ntBASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AC010486.1-201ENST00000511793 424 ntBASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC136Q96JN2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC136Q96JN2 MIR4319-201ENST00000577285 85 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms