Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR1244-3-201ENST00000635744 85 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 MIR1244-2-201ENST00000636449 85 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 MIR1244-4-202ENST00000636813 85 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AL365361.1-201ENST00000566942 3481 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS50Q96JG6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS50Q96JG6 Y_RNA.80-201ENST00000362996 102 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 SNORA63C-201ENST00000364578 129 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 MIR627-201ENST00000384979 97 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 MIR181B1-201ENST00000385240 110 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 RNA5SP494-201ENST00000410653 129 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS50Q96JG6 MTCO3P29-201ENST00000432119 779 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 Z82188.1-201ENST00000436709 154 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 CHEK2P4-201ENST00000450340 246 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 AC012308.1-201ENST00000451232 178 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 AC107626.1-201ENST00000471084 183 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 HMGN1P10-201ENST00000474557 553 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 RPL30P1-201ENST00000488676 339 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS50Q96JG6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS50Q96JG6 MIR5701-3-201ENST00000578890 82 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 MIR5701-1-201ENST00000585138 82 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS50Q96JG6 AL355877.2-201ENST00000603670 358 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 MIR5701-2-201ENST00000615634 82 ntBASIC2.94□□□□□ -1.94
VPS50Q96JG6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS50Q96JG6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS50Q96JG6 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 Y_RNA.428-201ENST00000384078 102 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 SNORA36A-201ENST00000384221 132 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 RNU6-748P-201ENST00000384648 107 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 snosnR66.1-201ENST00000391095 99 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 RNU6-1156P-201ENST00000410365 100 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 RNU2-25P-201ENST00000411041 191 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 AC096649.2-201ENST00000416186 393 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 MTND2P23-201ENST00000422990 651 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 RPL23AP95-201ENST00000426806 265 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 AC096644.2-201ENST00000429278 159 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 RPL39P29-201ENST00000447779 157 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS50Q96JG6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 AP001324.2-201ENST00000461163 319 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 GZMAP1-201ENST00000503054 631 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 SNORD116.3-201ENST00000517176 78 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 RNU6-988P-201ENST00000519081 107 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 CKS1BP7-201ENST00000522230 235 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 AC092447.9-201ENST00000603395 144 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
VPS50Q96JG6 AC083806.3-201ENST00000614016 455 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 UCA1.1-201ENST00000620952 75 ntBASIC2.93□□□□□ -1.94
VPS50Q96JG6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS50Q96JG6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 ZNF72P-201ENST00000425869 1908 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 RNU6-874P-201ENST00000362390 105 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 Y_RNA.314-201ENST00000365114 102 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 RNU6-851P-201ENST00000384565 107 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 MIR147B-201ENST00000390185 80 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 SNORA31.6-201ENST00000516241 130 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS50Q96JG6 HSPE1P4-201ENST00000550617 308 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 LARP7P3-201ENST00000579888 337 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC011471.1-201ENST00000585766 187 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 AC005034.5-201ENST00000604219 466 ntBASIC2.92□□□□□ -1.94
VPS50Q96JG6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 AC233981.2-201ENST00000611524 1614 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RNU6-529P-201ENST00000363383 104 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RNU6-487P-201ENST00000365430 104 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 Y_RNA.364-201ENST00000365532 101 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 Y_RNA.577-201ENST00000384794 101 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RNA5SP390-201ENST00000410191 113 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 AC113618.1-201ENST00000416747 285 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 AL358075.3-201ENST00000426289 226 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS50Q96JG6 RPL30P10-201ENST00000488148 337 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 AF186996.7-201ENST00000492781 209 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 SNORA25.11-201ENST00000515935 105 ntBASIC2.91□□□□□ -1.94
VPS50Q96JG6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms