Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.99□□□□□ -2.09
VMP1Q96GC9 SNORA44.1-201ENST00000517031 108 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 AP000873.5-201ENST00000533906 236 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 OR11H5P-201ENST00000554039 926 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 MIR5583-1-201ENST00000580941 59 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 AC116312.1-201ENST00000606841 314 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 PCGEM1.1-201ENST00000613431 131 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 AL354950.2-201ENST00000617939 290 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 WWP1P1-201ENST00000466609 2769 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 RNU6-1103P-201ENST00000384150 107 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 AF228730.1-201ENST00000397972 663 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AC002486.1-201ENST00000435098 391 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AL513124.1-201ENST00000450410 614 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AL163973.1-201ENST00000484753 577 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 AC008628.2-201ENST00000502605 298 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AC021231.3-201ENST00000558497 370 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 AC005786.1-201ENST00000588553 154 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 uc_338.34-201ENST00000617467 174 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 Z69908.1-201ENST00000622603 247 ntBASIC1.98□□□□□ -2.09
VMP1Q96GC9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VMP1Q96GC9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VMP1Q96GC9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VMP1Q96GC9 AL356292.1-201ENST00000283110 373 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 SNORA75-201ENST00000384158 137 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC068050.1-201ENST00000394891 380 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 MIR934-201ENST00000401241 83 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.97□□□□□ -2.09
VMP1Q96GC9 NCOR1P3-201ENST00000420479 303 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 MTCO2P3-201ENST00000442543 421 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC073415.1-201ENST00000449240 153 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 RPL31P3-201ENST00000458430 332 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 RPS3AP17-201ENST00000472594 777 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VMP1Q96GC9 RN7SKP298-201ENST00000515950 94 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.97□□□□□ -2.09
VMP1Q96GC9 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 EIF4A1P12-201ENST00000551910 141 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 CYP4A27P-201ENST00000567218 190 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 AC007684.1-201ENST00000609671 477 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.97□□□□□ -2.09
VMP1Q96GC9 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 AL606923.1-201ENST00000406616 190 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 RNU2-41P-201ENST00000410991 178 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 AP000275.1-201ENST00000411943 390 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 SNRPEP8-201ENST00000442866 260 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.96□□□□□ -2.1
VMP1Q96GC9 AC091874.1-201ENST00000511402 339 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 AC090115.3-201ENST00000553218 849 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.96□□□□□ -2.1
VMP1Q96GC9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
VMP1Q96GC9 Z98751.3-201ENST00000604447 521 ntBASIC1.96□□□□□ -2.1
VMP1Q96GC9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
VMP1Q96GC9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
VMP1Q96GC9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.96□□□□□ -2.1
VMP1Q96GC9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VMP1Q96GC9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
VMP1Q96GC9 Y_RNA.296-201ENST00000364930 108 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 RNU6-378P-201ENST00000384324 107 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VMP1Q96GC9 MTATP6P17-201ENST00000431030 672 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 RNU7-138P-201ENST00000459479 64 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 AC130509.1-201ENST00000464158 433 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 YWHAEP4-201ENST00000505390 198 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 AC087683.1-201ENST00000591187 441 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 AL391646.1-201ENST00000603860 190 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 HULC.1-201ENST00000612720 240 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 AL450472.1-202ENST00000637286 180 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 ELL2P3-201ENST00000457883 1602 ntBASIC1.95□□□□□ -2.1
VMP1Q96GC9 Y_RNA.255-201ENST00000364581 97 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 RNU4-42P-201ENST00000364738 142 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 RNA5SP219-201ENST00000390940 113 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 RNU6-1158P-201ENST00000391167 107 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms