Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL30P1-201ENST00000488676 339 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.53□□□□□ -1.84
ERCC4Q92889 RNU6-581P-201ENST00000516214 105 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 RNU6-794P-201ENST00000517261 64 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 CKS1BP7-201ENST00000522230 235 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 AL442163.3-201ENST00000554110 156 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC4Q92889 HMGN2P15-201ENST00000585707 270 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 AC019159.1-201ENST00000605094 187 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC4Q92889 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
ERCC4Q92889 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ERCC4Q92889 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.53□□□□□ -1.84
ERCC4Q92889 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ERCC4Q92889 GABRG2-229ENST00000641017 3628 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ERCC4Q92889 SNORD56.1-201ENST00000362913 68 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 Y_RNA.188-201ENST00000363952 111 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RNU6-487P-201ENST00000365430 104 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 Y_RNA.396-201ENST00000383949 103 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RNU6-968P-201ENST00000384076 107 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RNU6-17P-201ENST00000384245 107 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RNU6-18P-201ENST00000384527 107 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 Y_RNA.518-201ENST00000384552 113 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ERCC4Q92889 RPL21P75-201ENST00000396599 483 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RPL21P28-201ENST00000401418 483 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC023141.4-201ENST00000412031 328 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AL590556.1-201ENST00000423231 483 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RPEP5-201ENST00000441137 268 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 Z75741.1-201ENST00000446793 314 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 UQCRHP3-201ENST00000451503 251 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC010099.1-201ENST00000455434 375 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RPL21P39-201ENST00000463605 483 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC087190.1-201ENST00000484462 480 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC107032.1-201ENST00000485945 480 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC132942.1-201ENST00000486753 483 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC093591.1-201ENST00000491435 481 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AF186996.7-201ENST00000492781 209 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RPL21P16-201ENST00000495531 483 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 ANXA2P1-201ENST00000505539 926 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 RNU6-408P-201ENST00000515910 100 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 Y_RNA.706-201ENST00000516933 99 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 MIR2355-201ENST00000517199 87 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.52□□□□□ -1.85
ERCC4Q92889 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.52□□□□□ -1.85
ERCC4Q92889 AP002770.2-201ENST00000543613 532 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.52□□□□□ -1.85
ERCC4Q92889 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.52□□□□□ -1.85
ERCC4Q92889 AC007179.3-201ENST00000604976 235 ntBASIC3.52□□□□□ -1.85
ERCC4Q92889 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.52□□□□□ -1.85
ERCC4Q92889 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ERCC4Q92889 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.52□□□□□ -1.85
ERCC4Q92889 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ERCC4Q92889 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ERCC4Q92889 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.51□□□□□ -1.85
ERCC4Q92889 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ERCC4Q92889 AC108206.1-201ENST00000570186 4159 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 Z83843.1-201ENST00000604070 3685 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU1-76P-201ENST00000362903 159 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU5B-2P-201ENST00000363036 113 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 Y_RNA.222-201ENST00000364264 102 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNA5SP267-201ENST00000364893 126 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 Y_RNA.358-201ENST00000365491 99 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU6-622P-201ENST00000384272 103 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU6-1222P-201ENST00000384615 107 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 MIR628-201ENST00000385229 95 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 SNORD67-201ENST00000390833 111 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU6-907P-201ENST00000390924 102 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU6-130P-201ENST00000411112 103 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU6-1245P-201ENST00000411130 106 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.51□□□□□ -1.85
ERCC4Q92889 snoU13.28-201ENST00000459235 104 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RN7SL20P-201ENST00000488827 297 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RNU6-897P-201ENST00000517135 105 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.51□□□□□ -1.85
ERCC4Q92889 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.51□□□□□ -1.85
ERCC4Q92889 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.51□□□□□ -1.85
ERCC4Q92889 MIR5571-201ENST00000577998 113 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 AC125232.2-201ENST00000592457 143 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RPS29P30-201ENST00000600975 111 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 RMST_6.1-201ENST00000611980 203 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.51□□□□□ -1.85
ERCC4Q92889 MIR3529-201ENST00000637713 78 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.51□□□□□ -1.85
ERCC4Q92889 Z75746.1-201ENST00000440243 2080 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 MAPK10-322ENST00000641485 4530 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 Y_RNA.26-201ENST00000362539 101 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RNU6-770P-201ENST00000363929 105 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 U3.13-201ENST00000364804 214 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RNY3P4-201ENST00000384428 101 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RNVU1-14-201ENST00000384770 164 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RN7SKP61-201ENST00000410642 295 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 AL139281.1-201ENST00000422120 335 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.5□□□□□ -1.85
ERCC4Q92889 AC009296.1-201ENST00000443146 155 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 AL031183.1-201ENST00000457667 207 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 U8.22-201ENST00000459141 133 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RN7SL601P-201ENST00000471221 293 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 297.6 ms