Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC018659.1-201ENST00000551083 169 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MIR3169-201ENST00000578032 83 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC009994.1-201ENST00000606889 253 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC073614.1-201ENST00000438690 650 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 HSPE1P9-201ENST00000440046 311 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNA5SP57-201ENST00000459463 123 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC104982.1-201ENST00000478775 574 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC079382.1-201ENST00000493346 557 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNA5SP481-201ENST00000516814 122 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL353778.1-201ENST00000603149 408 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 OR4G3P-201ENST00000633500 913 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU4-1-201ENST00000363925 141 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNA5SP368-201ENST00000364298 116 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 SNORD1A-201ENST00000364968 72 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.559-201ENST00000384686 107 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MIR558-201ENST00000384920 94 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU6-1106P-201ENST00000390845 107 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.578-201ENST00000390903 88 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RPS25P9-201ENST00000435591 252 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RPL39P36-201ENST00000490784 156 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC093809.1-201ENST00000509155 340 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL021368.1-201ENST00000607490 540 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MIR8063-201ENST00000621930 81 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC099654.8-201ENST00000637757 681 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC006927.4-201ENST00000639187 543 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL589743.1-201ENST00000551932 2712 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 snoU2-30.2-201ENST00000362805 70 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 SNORD3E-201ENST00000362899 217 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 SNORA75B-201ENST00000384053 137 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU6-700P-201ENST00000391043 107 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RAP1BP3-201ENST00000407180 549 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL627311.1-201ENST00000431514 115 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.644-201ENST00000459006 113 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 snoU109.2-201ENST00000459316 135 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC010409.1-201ENST00000487382 476 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 COPS8P3-201ENST00000526024 482 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC007834.2-201ENST00000536310 343 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC068790.6-201ENST00000602558 258 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC123767.1-202ENST00000620407 817 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL391994.1-201ENST00000254724 282 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 SNORD32A-201ENST00000364805 84 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MIR194-1-201ENST00000384892 85 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL139824.2-201ENST00000458731 1095 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MTCO3P9-201ENST00000506989 781 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 TRAV32-201ENST00000553993 340 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RPL21P136-201ENST00000605378 396 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL354696.1-201ENST00000614652 497 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.110-201ENST00000363220 99 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU6-1210P-201ENST00000363775 107 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU5E-7P-201ENST00000365290 117 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC008267.5-201ENST00000424928 265 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MTCYBP39-201ENST00000437562 491 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RPS27AP8-201ENST00000452665 445 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 FCF1P6-201ENST00000456841 595 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 MTND1P36-201ENST00000522384 936 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC022022.2-201ENST00000602989 360 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC174048.1-201ENST00000603389 144 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC084824.5-201ENST00000612009 413 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU1-96P-201ENST00000364163 162 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC079140.5-201ENST00000507882 310 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 SUMO2P18-201ENST00000518873 252 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC027335.2-201ENST00000624030 375 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC099654.9-201ENST00000637055 678 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AC092104.1-201ENST00000497346 1441 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RNU6-778P-201ENST00000363269 103 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.408-201ENST00000383987 102 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 AL591034.2-201ENST00000402839 359 ntBASIC0.18□□□□□ -2.38
SYNE1Q8NF91 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.18□□□□□ -2.38
SYNE1Q8NF91 RPS3AP37-201ENST00000419176 745 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms