Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 AL021879.1-201ENST00000611756 288 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 U4.7-201ENST00000638126 106 ntBASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.69□□□□□ -2.3
ZNF439Q8NDP4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 Y_RNA.97-201ENST00000363094 102 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-1019P-201ENST00000364424 107 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-438P-201ENST00000365561 103 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-636P-201ENST00000384598 107 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-331P-201ENST00000384724 107 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-1176P-201ENST00000390955 107 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AL356776.1-201ENST00000406574 447 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 MTCYBP2-201ENST00000407745 171 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 EEF1A1P40-201ENST00000412883 573 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 MTCO1P21-201ENST00000416634 589 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 PIGFP2-201ENST00000421400 651 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 MTND1P20-201ENST00000430341 950 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 EXOSC3P1-201ENST00000448649 500 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RPL31P3-201ENST00000458430 332 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AL049829.1-201ENST00000465411 156 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AC112204.1-201ENST00000502591 103 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RN7SKP265-201ENST00000516448 223 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU5A-4P-201ENST00000516588 111 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 RNU6-113P-201ENST00000516653 101 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 CYCSP23-201ENST00000519781 313 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AP002453.2-201ENST00000533503 320 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 VN1R107P-201ENST00000601784 209 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AC097372.5-201ENST00000623665 376 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 AL157786.1-207ENST00000627771 695 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 SNORD98-201ENST00000636377 67 ntBASIC0.68□□□□□ -2.3
ZNF439Q8NDP4 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 RNU6-157P-201ENST00000383957 107 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 SNORA32.2-201ENST00000384049 122 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 SNORA24.1-201ENST00000384401 135 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 RPS27AP14-201ENST00000422868 454 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 MED13P1-201ENST00000428342 171 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC069257.2-201ENST00000441819 155 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 RPS4XP11-201ENST00000446897 772 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC103851.1-201ENST00000506833 274 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC117522.1-201ENST00000509821 380 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC087883.1-201ENST00000551882 391 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC008752.3-201ENST00000588113 712 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 MIR3976-201ENST00000606807 139 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 RNU6-87P-201ENST00000607561 108 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AL451064.1-201ENST00000607718 471 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 AC018645.2-201ENST00000609151 472 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 7SK.13-201ENST00000622040 250 ntBASIC0.67□□□□□ -2.3
ZNF439Q8NDP4 RNU6-862P-201ENST00000362804 105 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU6-105P-201ENST00000363909 104 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU4-1-201ENST00000363925 141 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU6-1141P-201ENST00000364520 107 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU4-56P-201ENST00000364700 142 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU6-39P-201ENST00000384344 107 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU6-809P-201ENST00000384461 107 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 MIR558-201ENST00000384920 94 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU2-39P-201ENST00000410604 198 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RN7SKP61-201ENST00000410642 295 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU6-607P-201ENST00000411283 108 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNU6-387P-201ENST00000411331 105 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNA5SP111-201ENST00000411386 101 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 ARL5AP1-201ENST00000418991 388 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 SNX2P2-201ENST00000424553 323 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AC119618.1-201ENST00000434191 222 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AC084290.1-201ENST00000434995 374 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RPS24P1-201ENST00000438550 371 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 ATP5J2P3-201ENST00000451550 258 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AC034244.1-201ENST00000507687 207 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RBBP4P6-201ENST00000508098 202 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms