Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC89Q8N998 AC009310.1-201ENST00000414414 451 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 AC012306.1-201ENST00000423267 114 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC89Q8N998 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC89Q8N998 SRRM1P2-201ENST00000464531 1192 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC89Q8N998 MIR3169-201ENST00000578032 83 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC89Q8N998 AC068944.2-201ENST00000610373 403 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 AC005520.5-201ENST00000613926 164 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 AL590240.4-201ENST00000616908 390 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 MTND5P26-201ENST00000426018 1752 ntBASIC2.22□□□□□ -2.05
CCDC89Q8N998 SNORD114-6-201ENST00000364393 72 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 SNORA69-201ENST00000383895 132 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-259P-201ENST00000383999 107 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-38P-201ENST00000384085 107 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-378P-201ENST00000384324 107 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU2-41P-201ENST00000410991 178 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 ARL5AP1-201ENST00000418991 388 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC89Q8N998 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC89Q8N998 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC89Q8N998 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-1069P-201ENST00000516612 133 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-612P-201ENST00000516909 102 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 RNU6-323P-201ENST00000521915 107 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 GNAI2P1-201ENST00000541815 315 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC89Q8N998 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC89Q8N998 MIR3162-201ENST00000581818 82 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 AL158209.2-201ENST00000619266 216 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 SNORA43.4-201ENST00000629559 138 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 AC243829.7-201ENST00000633081 225 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 MIR6863-201ENST00000636112 90 ntBASIC2.21□□□□□ -2.06
CCDC89Q8N998 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC89Q8N998 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 RNU6-1085P-201ENST00000363576 107 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 Y_RNA.409-201ENST00000383990 98 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 MIR208B-201ENST00000401172 77 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 EIF1AXP1-201ENST00000419267 435 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 AC007547.1-201ENST00000462177 490 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 RNU6-1038P-201ENST00000516516 104 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 RNU5F-4P-201ENST00000516581 114 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC89Q8N998 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC89Q8N998 AC016256.1-201ENST00000547971 354 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 NBR2-204ENST00000587322 63 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 AC005786.1-201ENST00000588553 154 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 AC098657.3-201ENST00000620434 263 ntBASIC2.2□□□□□ -2.06
CCDC89Q8N998 RNU6-227P-201ENST00000362865 103 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC89Q8N998 SNORA36A-201ENST00000384221 132 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 NDUFB4P4-201ENST00000404822 243 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC89Q8N998 U8.21-201ENST00000459536 136 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 Y_RNA.654-201ENST00000497848 106 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC89Q8N998 AC010486.1-201ENST00000511793 424 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 AL357078.3-201ENST00000607528 618 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 Z99129.1-201ENST00000612510 255 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC89Q8N998 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC89Q8N998 MTND4P23-201ENST00000447723 1363 ntBASIC2.19□□□□□ -2.06
CCDC89Q8N998 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC89Q8N998 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC89Q8N998 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC89Q8N998 Y_RNA.378-201ENST00000365652 113 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 SNORA32.2-201ENST00000384049 122 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC89Q8N998 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC89Q8N998 SRIP2-201ENST00000428470 166 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 SNRPEP8-201ENST00000442866 260 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 RPL23AP7-203ENST00000449021 469 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC89Q8N998 RNU7-14P-201ENST00000459331 62 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 AC114801.2-201ENST00000503825 781 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 HMGB3P17-201ENST00000504195 649 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 AC021146.2-201ENST00000504736 556 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 AP005597.4-201ENST00000526762 229 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 SNRPGP18-201ENST00000553000 214 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 PIGPP4-201ENST00000584447 307 ntBASIC2.18□□□□□ -2.06
CCDC89Q8N998 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC89Q8N998 Y_RNA.51-201ENST00000362725 102 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 SNORD31B-201ENST00000364977 69 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 SNORD116-2-201ENST00000384274 95 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 SNORD116-6-201ENST00000384711 96 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 MTCO3P40-201ENST00000392516 676 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 RNU2-66P-201ENST00000410650 161 ntBASIC2.17□□□□□ -2.06
CCDC89Q8N998 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms