Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SYNE4Q8N205 SNORD50.1-201ENST00000362987 71 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 U8.2-201ENST00000363156 134 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 Y_RNA.518-201ENST00000384552 113 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 RNU4-70P-201ENST00000384579 139 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 MIR215-201ENST00000384858 110 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 MIR9-1-201ENST00000385198 89 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AL591034.2-201ENST00000402839 359 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 RNA5SP494-201ENST00000410653 129 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AL096701.2-201ENST00000416920 238 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AL117339.3-201ENST00000418733 162 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 MTCO3P29-201ENST00000432119 779 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 RPEP5-201ENST00000441137 268 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC006539.3-201ENST00000454258 129 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 RPL23AP45-201ENST00000476406 468 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC025465.3-201ENST00000510570 311 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE4Q8N205 RNU7-4P-201ENST00000516961 62 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 RNU6-111P-201ENST00000517179 105 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE4Q8N205 AP003733.2-201ENST00000529409 171 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AMZ2P1-203ENST00000565833 850 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC073410.2-201ENST00000603240 332 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 MIR6817-201ENST00000615588 66 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC130454.1-201ENST00000622948 401 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC090617.7-201ENST00000623952 126 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 AC064859.1-201ENST00000624741 174 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SYNE4Q8N205 AP001148.1-201ENST00000624124 2359 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SYNE4Q8N205 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SYNE4Q8N205 MTND5P6-201ENST00000422338 1798 ntBASIC3.46□□□□□ -1.86
SYNE4Q8N205 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SYNE4Q8N205 ZNF299P-201ENST00000406845 1804 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNU6-428P-201ENST00000362942 107 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNU6-595P-201ENST00000363944 107 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNU6-395P-201ENST00000365662 106 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 Y_RNA.471-201ENST00000384312 102 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNU6-933P-201ENST00000384424 107 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 MIR625-201ENST00000385047 85 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 MIR301A-201ENST00000385261 86 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNU6-1093P-201ENST00000391194 107 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.45□□□□□ -1.86
SYNE4Q8N205 AC009963.1-201ENST00000417265 157 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.45□□□□□ -1.86
SYNE4Q8N205 RPS3P1-201ENST00000456781 192 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 snoU13.15-201ENST00000459407 104 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 SNRPGP3-201ENST00000469405 227 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AC090525.1-201ENST00000479116 478 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RPL30P5-201ENST00000494923 336 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNU6-143P-201ENST00000516942 93 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 RNA5SP291-201ENST00000517222 105 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.45□□□□□ -1.86
SYNE4Q8N205 SYF2P1-201ENST00000550658 413 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AC027176.1-201ENST00000560204 514 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 MIR3186-201ENST00000577404 85 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 MIR5696-201ENST00000578474 85 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 SNORD53-201ENST00000579969 78 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AL138825.1-201ENST00000618587 192 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AC141273.2-201ENST00000618989 130 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 AC048347.1-201ENST00000624621 427 ntBASIC3.45□□□□□ -1.86
SYNE4Q8N205 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYNE4Q8N205 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNE4Q8N205 SNORA67.4-201ENST00000384688 142 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 Y_RNA.592-201ENST00000410274 109 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 RNU2-14P-201ENST00000411053 191 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 EIF4EP2-201ENST00000422816 654 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 MTND3P9-201ENST00000429526 346 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 ARF4P2-201ENST00000430209 526 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 AC112220.1-201ENST00000434628 355 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 AC079354.2-201ENST00000453523 154 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 AC010469.2-201ENST00000496412 480 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 HMGB1P35-201ENST00000503360 598 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNE4Q8N205 RNU6-138P-201ENST00000515952 107 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 RNA5SP24-201ENST00000516478 95 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 RNA5SP148-201ENST00000516527 94 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 SNORA40.15-201ENST00000516884 107 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 AC025755.1-201ENST00000521306 278 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNE4Q8N205 AP001282.2-201ENST00000616149 309 ntBASIC3.44□□□□□ -1.86
SYNE4Q8N205 MTND5P9-201ENST00000503854 1755 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE4Q8N205 MIR148B-201ENST00000362252 99 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 SNORA20.1-201ENST00000364790 130 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 Y_RNA.539-201ENST00000384635 107 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 RNA5SP21-201ENST00000410917 96 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 RNU4-61P-201ENST00000411243 107 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 AC092047.1-201ENST00000424997 240 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE4Q8N205 TOMM20P4-201ENST00000427861 435 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 AL512844.2-201ENST00000433990 593 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE4Q8N205 U8.22-201ENST00000459141 133 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms