Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT78Q8N1N4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RNU6-1059P-201ENST00000363752 98 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 SNORD32A-201ENST00000364805 84 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.307-201ENST00000365022 117 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.512-201ENST00000384518 102 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 MIR627-201ENST00000384979 97 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AL591034.2-201ENST00000402839 359 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AL031121.1-201ENST00000406553 254 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RN7SKP61-201ENST00000410642 295 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RNU4-47P-201ENST00000410876 114 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RNU4-61P-201ENST00000411243 107 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 CYCSP48-201ENST00000417124 323 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AL590135.1-201ENST00000422215 156 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AL590556.1-201ENST00000423231 483 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC019205.3-201ENST00000424573 156 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 EIF4EP4-201ENST00000424916 578 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RPL30P4-201ENST00000429309 333 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 RPL23AP22-201ENST00000437556 453 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC016700.2-201ENST00000446011 156 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 GSTA11P-201ENST00000452866 669 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC109925.1-201ENST00000478069 331 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AIG1P1-201ENST00000503376 148 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC105245.1-201ENST00000581934 244 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 MIR3117-201ENST00000584034 78 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 MIR3616-201ENST00000584070 92 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AC104695.3-201ENST00000604052 296 ntBASIC3.06□□□□□ -1.92
KRT78Q8N1N4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRT78Q8N1N4 AP000560.1-201ENST00000624150 1937 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 SNORA71.3-201ENST00000362582 128 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.257-201ENST00000364596 102 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.496-201ENST00000384444 101 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 RNU4-70P-201ENST00000384579 139 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.645-201ENST00000391229 102 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AL357075.1-201ENST00000404107 726 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 RPL23AP95-201ENST00000426806 265 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 RPL30P1-201ENST00000488676 339 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AC113195.1-201ENST00000579952 141 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 RPL30P11-203ENST00000598995 310 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 PRR13P7-201ENST00000605538 430 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 U2.1-201ENST00000618978 145 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AC090517.3-201ENST00000625170 141 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 MTND5P9-201ENST00000503854 1755 ntBASIC3.05□□□□□ -1.92
KRT78Q8N1N4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRT78Q8N1N4 AC233981.2-201ENST00000611524 1614 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNU6-99P-201ENST00000364721 107 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNA5SP267-201ENST00000364893 126 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.404-201ENST00000383978 102 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 U6atac.2-201ENST00000408644 118 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 EIF4EP2-201ENST00000422816 654 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC104332.2-201ENST00000429959 156 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 PCNPP5-201ENST00000452246 481 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 snoU13.14-201ENST00000459372 104 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC091153.1-201ENST00000466297 402 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AL121594.1-201ENST00000475906 575 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC091874.1-201ENST00000511402 339 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNU6-120P-201ENST00000516077 103 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.670-201ENST00000516255 105 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNU1-143P-201ENST00000516296 146 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNU6-567P-201ENST00000516746 107 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNU6-699P-201ENST00000517081 110 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC021231.3-201ENST00000558497 370 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 MIR3136-201ENST00000583498 78 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AC011494.1-201ENST00000596454 237 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 U1.23-201ENST00000610293 146 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 RNU1-68P-201ENST00000615382 146 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 AL159153.1-201ENST00000619688 317 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 U1.39-201ENST00000621562 146 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 SNORD98-201ENST00000636377 67 ntBASIC3.04□□□□□ -1.92
KRT78Q8N1N4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms