Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-1050P-201ENST00000410388 107 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RNU6-174P-201ENST00000410406 106 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS52Q8N1B4 AF228730.4-201ENST00000421457 183 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RPL23AP95-201ENST00000426806 265 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS52Q8N1B4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RNU7-152P-201ENST00000458982 64 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RPL31P41-201ENST00000477967 372 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.670-201ENST00000516255 105 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.708-201ENST00000516950 96 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS52Q8N1B4 MTND4P29-201ENST00000503122 1372 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 SNORA70B-201ENST00000384210 135 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RNU6-842P-201ENST00000384269 107 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RNU6-790P-201ENST00000384479 105 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RNY4P36-201ENST00000391116 96 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RNU6-1245P-201ENST00000411130 106 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AC236972.2-201ENST00000434979 310 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AL031659.1-201ENST00000447075 539 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AP000705.1-201ENST00000454567 350 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 MRPS36P2-201ENST00000512569 299 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 SNORA31.6-201ENST00000516241 130 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 SNORD53-201ENST00000579969 78 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RPS15AP11-201ENST00000594193 385 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 MIR3976-201ENST00000606807 139 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AL050343.2-201ENST00000607338 280 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AL449363.1-201ENST00000617815 186 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AC006026.1-201ENST00000444025 1803 ntBASIC2.82□□□□□ -1.96
VPS52Q8N1B4 AL109809.4-201ENST00000603520 2185 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RNU6-1059P-201ENST00000363752 98 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 MIR592-201ENST00000384959 97 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AL591034.2-201ENST00000402839 359 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RPS20P15-201ENST00000412792 311 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AC009963.1-201ENST00000417265 157 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AL121890.1-201ENST00000435457 205 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AL513124.1-201ENST00000450410 614 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AP001324.2-201ENST00000461163 319 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RNU1-41P-201ENST00000516161 162 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RNA5SP282-201ENST00000516355 108 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RNU1-48P-201ENST00000516400 162 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 GLYCAM1-201ENST00000546596 285 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 MIR5690-201ENST00000583739 73 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AC009229.3-201ENST00000608056 282 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AC064859.1-201ENST00000624741 174 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 MIR203B-201ENST00000636080 86 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 MTND4LP32-201ENST00000636111 270 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 AL669831.3-213ENST00000636676 183 ntBASIC2.81□□□□□ -1.96
VPS52Q8N1B4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS52Q8N1B4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS52Q8N1B4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.259-201ENST00000364619 101 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 SNORA75.4-201ENST00000391278 119 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 CYCSP48-201ENST00000417124 323 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 MTCO2P27-201ENST00000420740 428 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 MTND3P9-201ENST00000429526 346 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC012308.1-201ENST00000451232 178 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 ELOCP24-201ENST00000456370 334 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 YWHAEP4-201ENST00000505390 198 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 ACA59.1-201ENST00000515966 143 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 RNA5SP24-201ENST00000516478 95 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC109329.1-201ENST00000518744 317 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS52Q8N1B4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC079598.5-201ENST00000547460 117 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AL133255.1-201ENST00000606374 441 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC096772.1-201ENST00000609146 564 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms