Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 U2.11-201ENST00000616345 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.2-201ENST00000616535 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.3-201ENST00000617785 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.19-201ENST00000618602 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU2-1-201ENST00000618664 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.6-201ENST00000619225 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.5-201ENST00000619465 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.10-201ENST00000620268 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX5Q8N196 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX5Q8N196 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU1-20P-201ENST00000363314 162 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 Y_RNA.343-201ENST00000365354 112 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 MIR491-201ENST00000384877 84 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SIX5Q8N196 BMS1P22-201ENST00000414726 313 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 AL451074.5-201ENST00000415894 435 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 RPL23AP46-201ENST00000438548 490 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 RPS20P10-201ENST00000451209 253 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 AC145146.1-201ENST00000496370 254 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 AC110768.1-201ENST00000509222 400 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX5Q8N196 AL137843.1-201ENST00000605078 385 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 AL354798.1-201ENST00000622505 329 ntBASIC4.31□□□□□ -1.72
SIX5Q8N196 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX5Q8N196 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX5Q8N196 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SIX5Q8N196 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIX5Q8N196 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIX5Q8N196 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX5Q8N196 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX5Q8N196 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX5Q8N196 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.3□□□□□ -1.72
SIX5Q8N196 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SIX5Q8N196 AC002546.1-201ENST00000588041 2504 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU6-655P-201ENST00000362858 107 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU6-1210P-201ENST00000363775 107 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 Y_RNA.182-201ENST00000363880 111 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU6-312P-201ENST00000364629 107 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU6-449P-201ENST00000383914 107 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 MIR1183-201ENST00000408856 89 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU5E-9P-201ENST00000411164 104 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNA5SP39-201ENST00000411245 120 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RPS26P2-201ENST00000440331 348 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU6-436P-201ENST00000516171 114 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 SNORA74D-201ENST00000516404 141 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 SNORA70.24-201ENST00000517233 118 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX5Q8N196 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.3□□□□□ -1.72
SIX5Q8N196 RNU1-30P-201ENST00000606575 163 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 AL391261.4-201ENST00000616012 481 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 AC068205.3-201ENST00000636385 468 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX5Q8N196 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX5Q8N196 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SIX5Q8N196 AL161912.2-201ENST00000565707 3007 ntBASIC4.3□□□□□ -1.72
SIX5Q8N196 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX5Q8N196 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX5Q8N196 AF127577.6-201ENST00000623352 2191 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX5Q8N196 SNORD87-201ENST00000364849 89 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 MIR3074-201ENST00000384885 81 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 RNU6-750P-201ENST00000390946 107 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 AL691449.1-201ENST00000426570 421 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 RPS27AP9-201ENST00000477681 438 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 AC025281.1-201ENST00000567026 265 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 AL160290.3-201ENST00000604869 165 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 AC096577.2-201ENST00000611455 153 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 AC091905.2-201ENST00000623143 306 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 AC009093.8-201ENST00000641769 292 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX5Q8N196 UBE3AP2-201ENST00000429033 2259 ntBASIC4.29□□□□□ -1.72
SIX5Q8N196 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX5Q8N196 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX5Q8N196 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX5Q8N196 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX5Q8N196 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX5Q8N196 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX5Q8N196 RNU4-15P-201ENST00000362613 141 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 Y_RNA.121-201ENST00000363309 113 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 SNORA18.2-201ENST00000383865 132 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 MIR93-201ENST00000385024 80 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 Y_RNA.580-201ENST00000391004 95 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 RNA5SP38-201ENST00000410750 119 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 AIMP1P2-201ENST00000425294 312 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 AL365496.1-201ENST00000426885 215 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX5Q8N196 RPS3P1-201ENST00000456781 192 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 AC091179.1-201ENST00000461606 579 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX5Q8N196 SUMO2P18-201ENST00000518873 252 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX5Q8N196 AC022655.2-201ENST00000577280 318 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX5Q8N196 MIR3200-201ENST00000580767 85 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms