Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.38□□□□□ -1.71
NPAS3Q8IXF0 AC099778.2-201ENST00000610904 211 ntBASIC4.38□□□□□ -1.71
NPAS3Q8IXF0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPAS3Q8IXF0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.38□□□□□ -1.71
NPAS3Q8IXF0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.38□□□□□ -1.71
NPAS3Q8IXF0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NPAS3Q8IXF0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 U3.15-201ENST00000365398 212 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 RNA5SP372-201ENST00000390836 115 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 RNU2-55P-201ENST00000411146 174 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AC008065.1-201ENST00000428525 348 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 RPL23AP46-201ENST00000438548 490 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 KC877373.1-201ENST00000479066 408 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 RNA5SP367-201ENST00000516557 118 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 CYCSP39-201ENST00000565821 309 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AC022655.2-201ENST00000577280 318 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AC025754.2-201ENST00000606491 432 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 MIR7151-201ENST00000617477 60 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.37□□□□□ -1.71
NPAS3Q8IXF0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 Y_RNA.243-201ENST00000364481 109 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RNU6-484P-201ENST00000384016 107 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 PTMAP2-201ENST00000397627 327 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 MIR1911-201ENST00000410783 80 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RPS26P42-201ENST00000413485 326 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AL353689.1-201ENST00000438895 199 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 snoU13.22-201ENST00000459428 104 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AC007215.1-201ENST00000464893 276 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RPS20P22-201ENST00000473700 357 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RPS29P19-201ENST00000479709 171 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AC091826.1-201ENST00000514065 313 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 SNORA18.4-201ENST00000516440 124 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 RNU6-365P-201ENST00000517113 106 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AL049861.1-201ENST00000603130 150 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AL606490.9-201ENST00000603331 271 ntBASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS3Q8IXF0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 ASNSP1-201ENST00000518311 1939 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 Y_RNA.313-201ENST00000365095 103 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 RNU1-44P-201ENST00000384453 163 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 MIR181B1-201ENST00000385240 110 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 SNORA68.2-201ENST00000391263 128 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 RN7SKP61-201ENST00000410642 295 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 CYP4F29P-201ENST00000420685 446 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 AC002075.2-201ENST00000425207 252 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 AL691449.1-201ENST00000426570 421 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 AL445584.1-201ENST00000431451 330 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 AC103975.1-201ENST00000482506 483 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 RNU6-1299P-201ENST00000516316 100 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 RNU7-115P-201ENST00000516433 55 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 SNORA31.16-201ENST00000516773 139 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 RNU6-158P-201ENST00000517104 100 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 MIR6075-201ENST00000620782 95 ntBASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
NPAS3Q8IXF0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms