Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AC009310.1-201ENST00000414414 451 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AL357134.1-201ENST00000445848 426 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 MTCO2P6-201ENST00000463134 685 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 MTCO3P7-201ENST00000510008 774 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 LRRC34P2-201ENST00000514850 553 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 RNU6-965P-201ENST00000516721 96 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 RNU6-430P-201ENST00000517078 107 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AP001893.2-201ENST00000526949 202 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AC007834.2-201ENST00000536310 343 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 CYP2C61P-201ENST00000604072 290 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AC109347.2-201ENST00000610220 349 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 AC063943.3-201ENST00000615562 356 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 uc_338.11-201ENST00000619132 160 ntBASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDKL3Q8IVW4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 RNU1-58P-201ENST00000362413 163 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 RNU6-348P-201ENST00000384386 107 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 RNU6-606P-201ENST00000384721 111 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 SNORD70.1-201ENST00000391007 85 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 MTCO2P11-201ENST00000431069 680 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 VN1R108P-201ENST00000431580 830 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 MTND4P32-201ENST00000437189 1237 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 USP9YP29-201ENST00000445112 563 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 PRPS1P1-201ENST00000445305 876 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC132479.1-201ENST00000449160 144 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC098862.1-201ENST00000504991 413 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 MTND2P33-201ENST00000506452 1031 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 RNU6-377P-201ENST00000515965 102 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.695-201ENST00000516715 107 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC023050.3-201ENST00000541142 333 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 OSBPL9P5-201ENST00000542581 171 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC008088.1-201ENST00000580993 280 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC023043.2-201ENST00000589678 1026 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC068790.2-201ENST00000602601 557 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC025449.1-201ENST00000603896 529 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC078883.4-201ENST00000623218 367 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 AC022418.1-201ENST00000624118 445 ntBASIC1.45□□□□□ -2.18
CDKL3Q8IVW4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 MIR378A-201ENST00000362177 66 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 U8.10-201ENST00000384260 133 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU6-434P-201ENST00000384376 107 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1127P-201ENST00000384580 107 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 SNORA16.2-201ENST00000390991 127 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU11-3P-201ENST00000391111 133 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU6-174P-201ENST00000410406 106 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RPS15AP10-201ENST00000432472 382 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 ARL2BPP4-201ENST00000506854 471 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RNU2-69P-201ENST00000516061 100 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 MTCO2P4-201ENST00000517968 247 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AL391840.1-201ENST00000571144 367 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 MIR4528-201ENST00000577763 90 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC123912.5-201ENST00000605470 343 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC008536.2-201ENST00000607284 349 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC104073.3-201ENST00000610942 955 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AL158063.1-201ENST00000615349 536 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC136475.10-201ENST00000620253 385 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 MTND5P10-201ENST00000603719 1809 ntBASIC1.44□□□□□ -2.18
CDKL3Q8IVW4 ZNF680P1-201ENST00000436625 1469 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 RNU6-661P-201ENST00000362409 107 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1120P-201ENST00000362988 108 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 RNU6-743P-201ENST00000364151 106 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 SNORD116-8-201ENST00000384365 95 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 MIR597-201ENST00000384968 97 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 RNU6-293P-201ENST00000411259 106 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 759.7 ms