Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 FCF1P8-201ENST00000510322 597 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AC022080.3-201ENST00000544433 482 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AC010928.2-201ENST00000588017 287 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.09□□□□□ -1.75
USP48Q86UV5 RMST_6.1-201ENST00000611980 203 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 XIST_intron.1-201ENST00000619444 68 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AC091903.1-201ENST00000624322 454 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 SNORA43.4-201ENST00000629559 138 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AL137790.1-201ENST00000634283 177 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 AC010889.1-201ENST00000566193 2666 ntBASIC4.09□□□□□ -1.75
USP48Q86UV5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP48Q86UV5 ZNF826P-207ENST00000622273 1910 ntBASIC4.09□□□□□ -1.76
USP48Q86UV5 RNU6-770P-201ENST00000363929 105 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 Y_RNA.358-201ENST00000365491 99 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 SNORA29-201ENST00000384183 140 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 Y_RNA.518-201ENST00000384552 113 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 Y_RNA.562-201ENST00000384695 113 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP48Q86UV5 RNU2-38P-201ENST00000410856 79 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RNU2-64P-201ENST00000411315 191 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AC078809.1-201ENST00000427601 140 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RPL21P40-201ENST00000428586 483 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 GPM6BP3-201ENST00000442797 145 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AL357552.1-201ENST00000445254 415 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.08□□□□□ -1.76
USP48Q86UV5 AL031183.1-201ENST00000457667 207 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 TOMM22P6-201ENST00000465035 409 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AC087477.1-201ENST00000465747 340 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RPS4XP22-201ENST00000480755 780 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RPL7P47-201ENST00000497299 556 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.08□□□□□ -1.76
USP48Q86UV5 ANXA2P1-201ENST00000505539 926 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RNU5B-3P-201ENST00000516601 115 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RN7SKP272-201ENST00000516988 232 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 RNU6-897P-201ENST00000517135 105 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 MIR2355-201ENST00000517199 87 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AC025281.1-201ENST00000567026 265 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 MIR4672-201ENST00000583126 81 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.08□□□□□ -1.76
USP48Q86UV5 AL390123.1-201ENST00000603216 237 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AL355877.2-201ENST00000603670 358 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AC006023.1-201ENST00000603944 259 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 MIR7106-201ENST00000612419 65 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 AL159153.1-201ENST00000619688 317 ntBASIC4.08□□□□□ -1.76
USP48Q86UV5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.08□□□□□ -1.76
USP48Q86UV5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP48Q86UV5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP48Q86UV5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP48Q86UV5 MFSD8-233ENST00000641482 4860 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP48Q86UV5 AC092268.1-201ENST00000342691 405 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 Y_RNA.350-201ENST00000365409 98 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 SNORA44-201ENST00000384584 132 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 RNU6-750P-201ENST00000390946 107 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 RNU6-121P-201ENST00000410525 99 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 RNU6-130P-201ENST00000411112 103 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.07□□□□□ -1.76
USP48Q86UV5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.07□□□□□ -1.76
USP48Q86UV5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.07□□□□□ -1.76
USP48Q86UV5 RN7SL442P-201ENST00000473804 320 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 RPL30P12-201ENST00000474666 353 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 AF186996.7-201ENST00000492781 209 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.07□□□□□ -1.76
USP48Q86UV5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.07□□□□□ -1.76
USP48Q86UV5 MIR5571-201ENST00000577998 113 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 AC137590.2-201ENST00000619709 240 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 U6.98-201ENST00000637157 84 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 AC002543.1-201ENST00000299783 1954 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 AP000560.1-201ENST00000624150 1937 ntBASIC4.07□□□□□ -1.76
USP48Q86UV5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP48Q86UV5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP48Q86UV5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
USP48Q86UV5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.06□□□□□ -1.76
USP48Q86UV5 Y_RNA.14-201ENST00000362415 103 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 Y_RNA.60-201ENST00000362831 98 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 RNU6-17P-201ENST00000384245 107 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 RNU6-18P-201ENST00000384527 107 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 MIR32-201ENST00000384965 70 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 MIR153-2-201ENST00000385225 87 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 MIR1302-6-201ENST00000408466 90 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.06□□□□□ -1.76
USP48Q86UV5 AL356968.1-201ENST00000416622 474 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 AC244670.1-201ENST00000436879 112 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 SUMO1P3-201ENST00000439961 304 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 RN7SL594P-201ENST00000470590 287 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 AC021205.2-201ENST00000480069 347 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 RNU6-397P-201ENST00000516226 104 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 RNU6-91P-201ENST00000607774 107 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 AL365434.2-201ENST00000607979 234 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 AL356274.2-201ENST00000624379 3752 ntBASIC4.06□□□□□ -1.76
USP48Q86UV5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.06□□□□□ -1.76
USP48Q86UV5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP48Q86UV5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP48Q86UV5 Y_RNA.19-201ENST00000362462 99 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 RNU5B-2P-201ENST00000363036 113 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms