Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC096772.1-201ENST00000609146 564 ntBASIC3.49□□□□□ -1.85
DDX53Q86TM3 AC018692.3-201ENST00000623929 123 ntBASIC3.49□□□□□ -1.85
DDX53Q86TM3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
DDX53Q86TM3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
DDX53Q86TM3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX53Q86TM3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC017071.1-201ENST00000564407 2204 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 Z75746.1-201ENST00000440243 2080 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX53Q86TM3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 RNU6-529P-201ENST00000363383 104 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 RNU4-50P-201ENST00000364361 141 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 MIR487A-201ENST00000385009 80 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 SNORA26.3-201ENST00000391119 136 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 COTL1P1-201ENST00000422309 375 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 USP9YP16-201ENST00000430287 407 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 USP9YP23-201ENST00000455085 407 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC090525.1-201ENST00000479116 478 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC109329.1-201ENST00000518744 317 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 AC115990.1-201ENST00000526957 301 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 AP002404.1-201ENST00000532005 451 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 AL078605.1-201ENST00000603529 500 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 AL159153.1-201ENST00000619688 317 ntBASIC3.48□□□□□ -1.85
DDX53Q86TM3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX53Q86TM3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX53Q86TM3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX53Q86TM3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX53Q86TM3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
DDX53Q86TM3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
DDX53Q86TM3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 SNORD114-19-201ENST00000363072 75 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 SNORA63.7-201ENST00000365579 123 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX53Q86TM3 U8.10-201ENST00000384260 133 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 IPO7P1-201ENST00000442031 636 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AP000870.1-201ENST00000472927 406 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 UBE2DNL-203ENST00000474922 222 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC022868.1-201ENST00000517767 391 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AL442163.3-201ENST00000554110 156 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX53Q86TM3 RAC1P9-201ENST00000604990 392 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC006386.2-201ENST00000624491 75 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC012005.1-201ENST00000624575 75 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 AC110079.1-202ENST00000635213 138 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 SNORD98-201ENST00000636377 67 ntBASIC3.47□□□□□ -1.85
DDX53Q86TM3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
DDX53Q86TM3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
DDX53Q86TM3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AL035425.3-201ENST00000564206 4996 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 RNU6-541P-201ENST00000384709 110 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 MIR1302-3-201ENST00000408128 138 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC012306.1-201ENST00000423267 114 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AP000705.1-201ENST00000454567 350 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC112771.1-201ENST00000463581 102 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AIG1P1-201ENST00000503376 148 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 RNU6-397P-201ENST00000516226 104 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC090517.1-201ENST00000569307 266 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 MIR4738-201ENST00000579134 87 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 MIR3149-201ENST00000584629 83 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 uc_338.1-201ENST00000612113 180 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC137590.2-201ENST00000619709 240 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 AC002064.3-201ENST00000623448 346 ntBASIC3.46□□□□□ -1.86
DDX53Q86TM3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
DDX53Q86TM3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
DDX53Q86TM3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms