Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AL451007.1-201ENST00000595491 289 ntBASIC2.71□□□□□ -1.98
USP43Q70EL4 AC093732.2-201ENST00000607950 274 ntBASIC2.71□□□□□ -1.98
USP43Q70EL4 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
USP43Q70EL4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
USP43Q70EL4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP43Q70EL4 MAPK10-322ENST00000641485 4530 ntBASIC2.71□□□□□ -1.98
USP43Q70EL4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP43Q70EL4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.71□□□□□ -1.98
USP43Q70EL4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
USP43Q70EL4 MIR422A-201ENST00000362286 90 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 RNU6-682P-201ENST00000363843 106 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 MIR517A-201ENST00000385001 87 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AL353621.1-201ENST00000418219 243 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 EIF4EP2-201ENST00000422816 654 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 RPL23AP58-201ENST00000440453 469 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AL031274.1-201ENST00000450334 232 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 OR2AQ1P-201ENST00000451972 200 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 RPL23AP31-201ENST00000456160 467 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC087588.1-201ENST00000462203 316 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
USP43Q70EL4 SUMO2P6-201ENST00000505273 288 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.7□□□□□ -1.98
USP43Q70EL4 MLLT10P2-201ENST00000506434 249 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 MTND3P25-201ENST00000509243 135 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC107393.1-201ENST00000512403 346 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 RNA5SP341-201ENST00000516261 117 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 CBX3P8-201ENST00000532412 525 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AP002770.2-201ENST00000543613 532 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC107016.2-201ENST00000547968 190 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 HIGD1AP1-201ENST00000550979 275 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.7□□□□□ -1.98
USP43Q70EL4 AC109446.1-201ENST00000566172 220 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 MIR5692A1-201ENST00000580523 69 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AL162713.1-201ENST00000604480 262 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC034102.8-201ENST00000615146 484 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AL138825.1-201ENST00000618587 192 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AL031601.2-202ENST00000622650 282 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC006386.2-201ENST00000624491 75 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AC012005.1-201ENST00000624575 75 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.7□□□□□ -1.98
USP43Q70EL4 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 AL450472.1-202ENST00000637286 180 ntBASIC2.7□□□□□ -1.98
USP43Q70EL4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.7□□□□□ -1.98
USP43Q70EL4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP43Q70EL4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.69□□□□□ -1.98
USP43Q70EL4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
USP43Q70EL4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
USP43Q70EL4 CUL1P1-201ENST00000509510 2425 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.69□□□□□ -1.98
USP43Q70EL4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 RNU6-81P-201ENST00000365608 104 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 RNU6-708P-201ENST00000384217 107 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AL353997.1-201ENST00000432936 108 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.69□□□□□ -1.98
USP43Q70EL4 RPEP5-201ENST00000441137 268 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP43Q70EL4 AL138752.1-201ENST00000452964 351 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.69□□□□□ -1.98
USP43Q70EL4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 RNU7-120P-201ENST00000459334 63 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 RPS29P12-201ENST00000460178 152 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.69□□□□□ -1.98
USP43Q70EL4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.69□□□□□ -1.98
USP43Q70EL4 RNU4-71P-201ENST00000516258 113 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 SNORA40.15-201ENST00000516884 107 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 RNU6-840P-201ENST00000517275 65 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AC069113.1-201ENST00000517763 267 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AC034114.1-201ENST00000520293 285 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.69□□□□□ -1.98
USP43Q70EL4 MIR548AI-201ENST00000579940 88 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 VN1R91P-201ENST00000594377 169 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 MIR6076-201ENST00000617521 113 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 AP000560.1-201ENST00000624150 1937 ntBASIC2.69□□□□□ -1.98
USP43Q70EL4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
USP43Q70EL4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.69□□□□□ -1.98
USP43Q70EL4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP43Q70EL4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP43Q70EL4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP43Q70EL4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
USP43Q70EL4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP43Q70EL4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP43Q70EL4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP43Q70EL4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 Y_RNA.170-201ENST00000363746 110 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 Y_RNA.200-201ENST00000364018 102 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 RNU4-50P-201ENST00000364361 141 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 RNU6-740P-201ENST00000364734 105 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 Y_RNA.277-201ENST00000364754 102 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 SNORA51.11-201ENST00000384442 131 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AC063979.1-201ENST00000415539 377 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.68□□□□□ -1.98
USP43Q70EL4 HMGB1P27-201ENST00000431429 603 ntBASIC2.68□□□□□ -1.98
USP43Q70EL4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms