Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-797P-201ENST00000363101 109 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 RNU4-66P-201ENST00000365199 138 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AL591034.2-201ENST00000402839 359 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 RNU2-41P-201ENST00000410991 178 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AL117339.3-201ENST00000418733 162 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 MTND3P23-201ENST00000431980 347 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC018634.1-201ENST00000437554 401 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 MTCO3P18-201ENST00000440206 761 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 SNRPGP7-201ENST00000469016 106 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 HMGN1P12-201ENST00000499125 195 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC114801.2-201ENST00000503825 781 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC016632.1-201ENST00000503994 196 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 SNORA14.1-201ENST00000516113 141 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC109635.3-201ENST00000529536 185 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC090115.3-201ENST00000553218 849 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 OR11H5P-201ENST00000554039 926 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 MYL12BP1-201ENST00000569826 507 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC009314.1-201ENST00000603871 304 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AL353621.2-201ENST00000605340 133 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC018889.1-201ENST00000605372 397 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC025253.1-201ENST00000613623 543 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC104260.1-201ENST00000616660 539 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 YWHAEP7-203ENST00000622054 312 ntBASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NHLRC1Q6VVB1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC008555.8-201ENST00000623602 2168 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-827P-201ENST00000365553 106 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 SNORA69-201ENST00000383895 132 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-876P-201ENST00000391295 104 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AL356776.1-201ENST00000406574 447 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 MIR1294-201ENST00000408503 142 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-1148P-201ENST00000410992 104 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 TRBV12-1-201ENST00000479785 344 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 HMGB1P35-201ENST00000503360 598 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 CENPUP1-201ENST00000526649 1202 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 HSPE1P4-201ENST00000550617 308 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC078814.3-201ENST00000553036 491 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AL034555.1-201ENST00000604816 211 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC123912.5-201ENST00000605470 343 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.804-201ENST00000615262 101 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 CTSLP2-204ENST00000629029 392 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 MIR3662-201ENST00000637030 95 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC024614.3-201ENST00000637860 256 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 AC241585.2-209ENST00000638217 143 ntBASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NHLRC1Q6VVB1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.61-201ENST00000362835 102 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-428P-201ENST00000362942 107 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.279-201ENST00000364763 95 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-43P-201ENST00000384302 107 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.509-201ENST00000384506 99 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 RN7SKP61-201ENST00000410642 295 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 POLHP1-201ENST00000411806 470 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 SEPT14P3-201ENST00000439401 183 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AL732372.2-207ENST00000445840 183 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 SEPT14P2-201ENST00000453405 183 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AL353752.1-201ENST00000454946 260 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 SEPT14P4-201ENST00000513445 186 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 SNORA31.25-201ENST00000517242 134 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 IGLV3-17-201ENST00000519099 244 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AC107953.1-201ENST00000522216 297 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 FO082796.1-201ENST00000523795 183 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AC087241.2-201ENST00000535801 324 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 FGF7P1-201ENST00000582820 288 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 MIR4424-201ENST00000585257 86 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 VN1R80P-201ENST00000597126 338 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms