Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 SNORA37-201ENST00000384504 129 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 U3.40-201ENST00000408706 208 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AC016397.1-201ENST00000412463 242 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AC027124.2-201ENST00000428249 105 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 RPS3P1-201ENST00000456781 192 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 RN7SL132P-201ENST00000478131 296 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AC099522.1-202ENST00000514718 367 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 RNU6-346P-201ENST00000516288 111 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AC244505.7-201ENST00000599675 272 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AP001485.1-201ENST00000604799 199 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AL034408.1-202ENST00000636088 415 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 AC068205.3-201ENST00000636385 468 ntBASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.69□□□□□ -1.82
LRFN4Q6PJG9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 RNU6-655P-201ENST00000362858 107 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 Y_RNA.398-201ENST00000383952 99 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 MIR186-201ENST00000384988 86 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC004386.2-201ENST00000441858 148 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC091179.1-201ENST00000461606 579 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 RPL31P41-201ENST00000477967 372 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC145146.1-201ENST00000496370 254 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC025554.1-201ENST00000505641 188 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 HMGB3P3-201ENST00000510526 400 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 RNU6-436P-201ENST00000516171 114 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC025281.1-201ENST00000567026 265 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 U7.8-201ENST00000619968 63 ntBASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.68□□□□□ -1.82
LRFN4Q6PJG9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 RNU6-324P-201ENST00000363957 106 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 RNA5SP246-201ENST00000458909 119 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 RNU7-170P-201ENST00000459303 61 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 GNRHR2P1-201ENST00000555315 631 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 AC022655.2-201ENST00000577280 318 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 MIR5006-201ENST00000583027 110 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 MIR486-1-201ENST00000612171 68 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 AC006111.3-201ENST00000622137 383 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 MTND1P7-201ENST00000632801 297 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 AL353746.1-201ENST00000566293 6881 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 AC026241.1-201ENST00000517873 2142 ntBASIC3.67□□□□□ -1.82
LRFN4Q6PJG9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 MIR383-201ENST00000362257 73 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 RNU6-454P-201ENST00000364292 107 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 RNU4-17P-201ENST00000365598 141 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 RNU1-57P-201ENST00000384491 166 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 U3.39-201ENST00000408569 239 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AC004866.1-201ENST00000411748 78 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AL451074.5-201ENST00000415894 435 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AC017083.1-201ENST00000428093 483 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 TOMM22P2-201ENST00000430735 237 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 RPL23AP46-201ENST00000438548 490 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AC006011.1-201ENST00000442758 349 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 PPIAP15-201ENST00000479662 484 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AP003730.1-201ENST00000524605 285 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 CYCSP29-201ENST00000533731 318 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AC025884.1-201ENST00000556034 378 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AL078604.3-201ENST00000615580 211 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 AL445567.2-201ENST00000618935 498 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 MIR8059-201ENST00000620427 81 ntBASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LRFN4Q6PJG9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
LRFN4Q6PJG9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
LRFN4Q6PJG9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.82
LRFN4Q6PJG9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 RNU1-75P-201ENST00000347264 129 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.121-201ENST00000363309 113 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.580-201ENST00000391004 95 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms