Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 USP9YP23-201ENST00000455085 407 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 SNORD127-201ENST00000458892 86 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC091179.1-201ENST00000461606 579 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNA5SP76-201ENST00000516277 87 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNY3P15-201ENST00000516297 97 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNU6-897P-201ENST00000517135 105 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 RNA5SP291-201ENST00000517222 105 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC144568.1-201ENST00000520139 137 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC005357.1-201ENST00000588399 301 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC078899.3-201ENST00000599065 212 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC024153.1-201ENST00000603103 365 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC011373.1-201ENST00000607270 237 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC068831.7-201ENST00000616954 363 ntBASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF549Q6P9A3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 RNU6-227P-201ENST00000362865 103 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 RNU6-942P-201ENST00000363002 107 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 SNORA51.11-201ENST00000384442 131 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.562-201ENST00000384695 113 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 MIR128-1-201ENST00000384921 82 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 SNORA69.1-201ENST00000390904 137 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AL590383.1-201ENST00000428602 75 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC098831.1-201ENST00000440661 216 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 RPEP5-201ENST00000441137 268 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC025465.3-201ENST00000510570 311 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC034114.1-201ENST00000520293 285 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 AC008962.1-201ENST00000605729 304 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 FTX_3.1-201ENST00000610451 147 ntBASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNF549Q6P9A3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC010615.1-201ENST00000594254 1764 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-105P-201ENST00000363909 104 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-770P-201ENST00000363929 105 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-700P-201ENST00000391043 107 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC007098.1-201ENST00000420122 367 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RPL21P40-201ENST00000428586 483 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 Z98949.2-201ENST00000440996 144 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 LINC01399-202ENST00000458450 244 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-1132P-201ENST00000459214 107 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RPL30P5-201ENST00000494923 336 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-377P-201ENST00000515965 102 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-1143P-201ENST00000516125 104 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 RNU6-397P-201ENST00000516226 104 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC022080.3-201ENST00000544433 482 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 ZNF861P-201ENST00000588126 639 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC060766.3-201ENST00000591442 263 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AC078938.1-201ENST00000620993 318 ntBASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
ZNF549Q6P9A3 CUL1P1-201ENST00000509510 2425 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.19-201ENST00000362462 99 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 RNU4-50P-201ENST00000364361 141 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.288-201ENST00000364854 92 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 RNU1-140P-201ENST00000365040 165 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 RNU6-611P-201ENST00000384276 104 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.526-201ENST00000384572 110 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 RNU6-713P-201ENST00000384761 107 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 SNORA12.2-201ENST00000391040 156 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 RNU2-38P-201ENST00000410856 79 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC010469.2-201ENST00000496412 480 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms