Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AP000275.1-201ENST00000411943 390 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 ARL5AP1-201ENST00000418991 388 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 RPL38P4-201ENST00000502376 214 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 SNORD60.2-201ENST00000516883 86 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 TRAV32-201ENST00000553993 340 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 MIR4529-201ENST00000578110 78 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC010525.2-201ENST00000590920 195 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AC064859.1-201ENST00000624741 174 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 AL450472.1-202ENST00000637286 180 ntBASIC2.09□□□□□ -2.07
CASC4Q6P4E1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CASC4Q6P4E1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CASC4Q6P4E1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AC092268.1-201ENST00000342691 405 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 RNU6-301P-201ENST00000384277 107 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AL590002.1-201ENST00000406554 418 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AC027124.2-201ENST00000428249 105 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.08□□□□□ -2.08
CASC4Q6P4E1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 RNA5SP233-201ENST00000459153 113 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AC083904.1-201ENST00000487828 231 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.08□□□□□ -2.08
CASC4Q6P4E1 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AC078795.3-201ENST00000602913 472 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CASC4Q6P4E1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.08□□□□□ -2.08
CASC4Q6P4E1 SNORA43.4-201ENST00000629559 138 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 MIR1321-201ENST00000637766 79 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 MTND4P23-201ENST00000447723 1363 ntBASIC2.08□□□□□ -2.08
CASC4Q6P4E1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 SNORA36A-201ENST00000384221 132 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.07□□□□□ -2.08
CASC4Q6P4E1 MTND3P21-201ENST00000433774 331 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AL359672.1-201ENST00000442302 409 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.07□□□□□ -2.08
CASC4Q6P4E1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC016632.1-201ENST00000503994 196 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.07□□□□□ -2.08
CASC4Q6P4E1 ANXA2P1-201ENST00000505539 926 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 MIR449C-201ENST00000516047 92 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 RNU6-612P-201ENST00000516909 102 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC007375.1-201ENST00000554513 578 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AL157687.1-201ENST00000554853 619 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.07□□□□□ -2.08
CASC4Q6P4E1 DISC2.1-201ENST00000612827 205 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 FAM157A-202ENST00000615155 405 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AL359314.1-201ENST00000616913 261 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 AC121333.1-201ENST00000567488 2709 ntBASIC2.07□□□□□ -2.08
CASC4Q6P4E1 CENPCP1-201ENST00000533085 2578 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.06□□□□□ -2.08
CASC4Q6P4E1 RNU6-451P-201ENST00000362921 107 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 XGY1-201ENST00000381172 446 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 SNORD116-4-201ENST00000384733 96 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 MTCYBP2-201ENST00000407745 171 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 MIR1294-201ENST00000408503 142 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 SRIP2-201ENST00000428470 166 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 MRPS10P2-201ENST00000431226 381 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 AC008628.2-201ENST00000502605 298 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.06□□□□□ -2.08
CASC4Q6P4E1 RNU6-720P-201ENST00000516363 108 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.06□□□□□ -2.08
CASC4Q6P4E1 AC016957.1-201ENST00000534895 309 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.06□□□□□ -2.08
CASC4Q6P4E1 EIF1P4-201ENST00000572664 335 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 AC004492.1-201ENST00000607036 742 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 AC092881.1-201ENST00000638218 2733 ntBASIC2.06□□□□□ -2.08
CASC4Q6P4E1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 RNY3P3-201ENST00000363816 102 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms