Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-234P-201ENST00000365229 104 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 MTCYBP2-201ENST00000407745 171 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 RNU4-26P-201ENST00000410270 107 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 EIF4EP2-201ENST00000422816 654 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AL133396.1-201ENST00000432048 687 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC109446.1-201ENST00000566172 220 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC087241.4-201ENST00000612441 480 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.73□□□□□ -2.13
NIPAL3Q6P499 AC245060.5-201ENST00000610778 3293 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 Y_RNA.255-201ENST00000364581 97 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 Y_RNA.359-201ENST00000365498 102 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 Y_RNA.504-201ENST00000384481 104 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 RNA5SP219-201ENST00000390940 113 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 SNORD37.1-201ENST00000390968 65 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 RNU6-1158P-201ENST00000391167 107 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 RNU2-20P-201ENST00000410425 191 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 CDK8P2-201ENST00000415020 547 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 OOSP1P1-201ENST00000423265 274 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 RPL23AP95-201ENST00000426806 265 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AL121601.2-201ENST00000438019 707 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 HMGN2P18-201ENST00000450680 270 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 MTCO2P18-201ENST00000457151 658 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 RPL31P3-201ENST00000458430 332 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 RNU7-138P-201ENST00000459479 64 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AC108078.1-201ENST00000508073 725 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AC005741.1-201ENST00000511094 432 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AC090115.3-201ENST00000553218 849 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AP001836.1-201ENST00000604675 523 ntBASIC1.72□□□□□ -2.13
NIPAL3Q6P499 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
NIPAL3Q6P499 AC092881.1-201ENST00000638218 2733 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 Y_RNA.381-201ENST00000365666 102 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AL079342.1-201ENST00000401460 267 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 RNU4-55P-201ENST00000410731 137 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AL353193.1-201ENST00000421444 268 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AL606489.2-201ENST00000433886 234 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 MTCO2P16-201ENST00000436962 677 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AL035666.1-201ENST00000446195 348 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC087884.1-201ENST00000469738 328 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 RN7SL429P-201ENST00000479090 223 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 RN7SL489P-201ENST00000486185 223 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 RN7SL327P-201ENST00000488659 223 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC078795.3-201ENST00000602913 472 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 RN7SKP299-201ENST00000606679 301 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 HULC.1-201ENST00000612720 240 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 RN7SL853P-201ENST00000617250 223 ntBASIC1.71□□□□□ -2.14
NIPAL3Q6P499 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NIPAL3Q6P499 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 U3.9-201ENST00000363823 204 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 Y_RNA.582-201ENST00000391023 95 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 SNORA26.3-201ENST00000391119 136 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 RNA5SP201-201ENST00000410316 124 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AL030996.1-201ENST00000411430 235 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 MTCO2P3-201ENST00000442543 421 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 FTH1P25-201ENST00000447665 469 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AL513124.1-201ENST00000450410 614 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AC079140.3-201ENST00000511111 550 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 Y_RNA.688-201ENST00000516565 95 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 RNU6-567P-201ENST00000516746 107 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AC021231.3-201ENST00000558497 370 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 MIR3945-201ENST00000581853 98 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 AC087683.1-201ENST00000591187 441 ntBASIC1.7□□□□□ -2.14
NIPAL3Q6P499 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.7□□□□□ -2.14
NIPAL3Q6P499 CBX3P1-201ENST00000325243 554 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 SNORD114-1-201ENST00000362705 72 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 RNA5SP493-201ENST00000364115 91 ntBASIC1.69□□□□□ -2.14
NIPAL3Q6P499 RNU6-1042P-201ENST00000384204 107 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms