Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 ZNF299P-201ENST00000406845 1804 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 RNU1-23P-201ENST00000363361 144 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 RNU6-595P-201ENST00000363944 107 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 RNU1-33P-201ENST00000364249 162 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 SNORA75.6-201ENST00000391318 127 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 AC008155.2-201ENST00000464337 397 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 MIR5701-3-201ENST00000578890 82 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 MIR4273-201ENST00000582824 84 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 MIR5701-1-201ENST00000585138 82 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 MIR5701-2-201ENST00000615634 82 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 SCARNA4-201ENST00000629045 128 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 AC233981.2-201ENST00000611524 1614 ntBASIC3.01□□□□□ -1.93
PPP4R4Q6NUP7 AC006026.1-201ENST00000444025 1803 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AC069528.2-201ENST00000624849 1991 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 SNORA38.1-201ENST00000364172 131 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 RNU6-890P-201ENST00000384121 107 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 MTCYBP2-201ENST00000407745 171 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 HMGB3P2-201ENST00000411913 584 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AC006028.1-201ENST00000438379 402 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 RBMY2UP-201ENST00000453474 324 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 BX510359.1-201ENST00000456973 237 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AC018868.1-201ENST00000491307 315 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AC008549.1-201ENST00000512900 643 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 SNORA70.24-201ENST00000517233 118 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AP000889.1-201ENST00000530968 660 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 MIR5690-201ENST00000583739 73 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 PISRT1.1-201ENST00000616930 107 ntBASIC3□□□□□ -1.93
PPP4R4Q6NUP7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PPP4R4Q6NUP7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RNU6-944P-201ENST00000364023 107 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 U8.10-201ENST00000384260 133 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 SNORA41-201ENST00000384675 132 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 MIR487A-201ENST00000385009 80 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC012306.1-201ENST00000423267 114 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RPL30P15-201ENST00000457129 321 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 Y_RNA.653-201ENST00000459091 95 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RPL30P10-201ENST00000488148 337 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC145146.1-201ENST00000496370 254 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AL161756.2-201ENST00000604597 246 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AL133255.1-201ENST00000606374 441 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC005520.5-201ENST00000613926 164 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC092608.2-201ENST00000624427 218 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 AC108206.1-201ENST00000570186 4159 ntBASIC2.99□□□□□ -1.93
PPP4R4Q6NUP7 RNA5SP267-201ENST00000364893 126 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 Y_RNA.419-201ENST00000384041 102 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 RNU1-52P-201ENST00000384190 164 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 RNU1-148P-201ENST00000384472 162 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 SNORA46.1-201ENST00000391069 153 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC007064.1-201ENST00000412238 351 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 MTCO3P29-201ENST00000432119 779 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AL353997.1-201ENST00000432936 108 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC011816.1-201ENST00000441346 546 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC009238.1-201ENST00000442165 424 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC009237.6-201ENST00000446969 424 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AL353705.4-201ENST00000449661 238 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC087477.1-201ENST00000465747 340 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AP004217.1-201ENST00000480579 346 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC068781.1-201ENST00000488231 618 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 CYCSP26-201ENST00000534107 320 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 AL157817.1-201ENST00000614264 790 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PPP4R4Q6NUP7 RNU4-56P-201ENST00000364700 142 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 SNORA25B-201ENST00000365507 128 ntBASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.97□□□□□ -1.93
PPP4R4Q6NUP7 RNU6-378P-201ENST00000384324 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms