Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.1
HIST2H2AA3Q6FI13 AP000560.1-201ENST00000624150 1937 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORA46.1-201ENST00000391069 153 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR1294-201ENST00000408503 142 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AL139156.1-201ENST00000412785 841 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 RPL23AP95-201ENST00000426806 265 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 TIMM9P3-201ENST00000428659 274 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AL133396.1-201ENST00000432048 687 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORA59A-201ENST00000459326 152 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 Y_RNA.654-201ENST00000497848 106 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC091885.1-201ENST00000506658 268 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC105313.1-201ENST00000509121 353 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU6-991P-201ENST00000516168 107 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC087854.1-201ENST00000519706 414 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC104576.1-201ENST00000524225 88 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR4513-201ENST00000581077 86 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR5692C1-201ENST00000585309 91 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC078795.3-201ENST00000602913 472 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AL078605.1-201ENST00000603529 500 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AL356157.2-201ENST00000605122 111 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC097065.2-201ENST00000608159 533 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.11
HIST2H2AA3Q6FI13 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORD32B-201ENST00000364460 84 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORA36A-201ENST00000384221 132 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR17-201ENST00000385012 84 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 EIF1AXP1-201ENST00000419267 435 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU6-1037P-201ENST00000459571 107 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU6-1208P-201ENST00000459588 107 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC016632.1-201ENST00000503994 196 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC093259.1-201ENST00000509755 300 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU6-1281P-201ENST00000516223 105 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AK6P1-201ENST00000540219 478 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR4648-201ENST00000580107 72 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AF250324.2-201ENST00000608299 610 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 AC093783.1-201ENST00000612976 329 ntBASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.89□□□□□ -2.11
HIST2H2AA3Q6FI13 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 Y_RNA.167-201ENST00000363735 109 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU4-56P-201ENST00000364700 142 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORD14D-201ENST00000384390 87 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR514A2-201ENST00000385131 88 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR514A3-201ENST00000385132 88 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORA40.19-201ENST00000390846 128 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 SRIP3-201ENST00000413200 219 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 TRBV12-1-201ENST00000479785 344 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 RPL38P4-201ENST00000502376 214 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 SNORA19.2-201ENST00000516013 114 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU6-314P-201ENST00000516574 104 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AC091544.4-201ENST00000555268 342 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 HMGB1P33-201ENST00000563485 527 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AC109446.1-201ENST00000566172 220 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 MIR3923-201ENST00000579521 83 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 RNU6-89P-201ENST00000606519 100 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AC004492.1-201ENST00000607036 742 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 AL450472.1-202ENST00000637286 180 ntBASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
HIST2H2AA3Q6FI13 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
HIST2H2AA3Q6FI13 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms