Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-429P-201ENST00000384582 108 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 RNU6-381P-201ENST00000391259 108 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 U3.37-201ENST00000408528 213 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 RNU2-68P-201ENST00000410878 191 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 RNU6-1199P-201ENST00000411249 104 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 HMGN2P31-201ENST00000432430 273 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF43Q68DV7 AC016925.1-201ENST00000458303 298 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 RNU6-625P-201ENST00000459412 107 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 KC877373.1-201ENST00000479066 408 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 PPIAP15-201ENST00000479662 484 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 MLLT10P2-201ENST00000506434 249 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 SCARNA14-201ENST00000516903 136 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 AC100767.1-201ENST00000528178 123 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 CYCSP30-201ENST00000546447 172 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 AC004467.1-201ENST00000615678 330 ntBASIC4.04□□□□□ -1.76
RNF43Q68DV7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
RNF43Q68DV7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF43Q68DV7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF43Q68DV7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RNF43Q68DV7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF43Q68DV7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF43Q68DV7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF43Q68DV7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF43Q68DV7 RNU6-199P-201ENST00000362954 107 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 MIR3074-201ENST00000384885 81 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 RNU6-578P-201ENST00000390980 103 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 RNU6-1245P-201ENST00000411130 106 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AL358075.3-201ENST00000426289 226 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 U8.19-201ENST00000459095 133 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AL121594.1-201ENST00000475906 575 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 RN7SL323P-201ENST00000494712 295 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 UBE2CP3-201ENST00000502715 450 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AC107027.2-201ENST00000512197 115 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 RNU6-155P-201ENST00000516347 100 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 RNU6-659P-201ENST00000516454 104 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 RNU6-1198P-201ENST00000516904 67 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AC087499.8-201ENST00000578406 226 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 AL670379.2-201ENST00000604983 252 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AC010999.1-201ENST00000611856 324 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 TUG1_4.1-201ENST00000619464 181 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 AC091932.3-201ENST00000624223 323 ntBASIC4.03□□□□□ -1.76
RNF43Q68DV7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF43Q68DV7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF43Q68DV7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF43Q68DV7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF43Q68DV7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.03□□□□□ -1.77
RNF43Q68DV7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
RNF43Q68DV7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF43Q68DV7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 RNU6-873P-201ENST00000363833 107 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 SNORD115-8-201ENST00000363856 82 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 SNORD115-38-201ENST00000365037 82 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 MIR1251-201ENST00000408552 70 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 RPL23AP95-201ENST00000426806 265 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 EEF1B2P7-201ENST00000451177 676 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 AC018448.1-201ENST00000552843 316 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 MIR4679-2-201ENST00000578358 77 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 MIR4744-201ENST00000581563 82 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 MIR5195-201ENST00000583555 115 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 AC011471.1-201ENST00000585766 187 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 AC069294.1-201ENST00000608397 350 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 AC011603.4-201ENST00000611325 277 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 Y_RNA.802-201ENST00000614892 130 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 AL359693.1-201ENST00000614959 2407 ntBASIC4.02□□□□□ -1.77
RNF43Q68DV7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF43Q68DV7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF43Q68DV7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF43Q68DV7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 Y_RNA.172-201ENST00000363765 102 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 Y_RNA.563-201ENST00000384707 108 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 RNU6-763P-201ENST00000390865 106 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 RNU6-1248P-201ENST00000391096 64 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 RNU6-1064P-201ENST00000410626 104 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 RPS29P4-201ENST00000414733 161 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 NDUFB4P7-201ENST00000423198 363 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 RPL23AP58-201ENST00000440453 469 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 SNRPGP7-201ENST00000469016 106 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 AC016256.1-201ENST00000547971 354 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms