Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.58□□□□□ -2
CCDC30Q5VVM6 RNU6-451P-201ENST00000362921 107 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AP000275.1-201ENST00000411943 390 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 MTCO1P21-201ENST00000416634 589 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AL133396.1-201ENST00000432048 687 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AC244670.1-201ENST00000436879 112 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.58□□□□□ -2
CCDC30Q5VVM6 IFNA11P-201ENST00000446352 526 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.58□□□□□ -2
CCDC30Q5VVM6 RNA5SP137-201ENST00000516833 135 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AC034114.1-201ENST00000520293 285 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AP005597.4-201ENST00000526762 229 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.58□□□□□ -2
CCDC30Q5VVM6 BNIP3P25-201ENST00000596023 559 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.58□□□□□ -2
CCDC30Q5VVM6 ELOCP5-201ENST00000604924 333 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 MIR6840-201ENST00000611937 71 ntBASIC2.58□□□□□ -2
CCDC30Q5VVM6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CCDC30Q5VVM6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC30Q5VVM6 AP006437.1-201ENST00000641440 3685 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC092268.1-201ENST00000342691 405 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 U3.13-201ENST00000364804 214 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 RNU6-142P-201ENST00000384019 107 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 SNORA6-201ENST00000384033 151 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 SNORA26.3-201ENST00000391119 136 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 CBX3P6-201ENST00000430257 527 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC100830.2-201ENST00000581636 240 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC010525.2-201ENST00000590920 195 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.57□□□□□ -2
CCDC30Q5VVM6 AL121757.2-201ENST00000611223 313 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 AC139792.2-201ENST00000624218 587 ntBASIC2.57□□□□□ -2
CCDC30Q5VVM6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC30Q5VVM6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCDC30Q5VVM6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 Y_RNA.38-201ENST00000362617 102 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 RNU6-1329P-201ENST00000365664 107 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 RNU6-546P-201ENST00000383991 107 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 RNU6-1215P-201ENST00000384441 102 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 Y_RNA.516-201ENST00000384541 124 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 HMGB3P2-201ENST00000411913 584 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.56□□□□□ -2
CCDC30Q5VVM6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.56□□□□□ -2
CCDC30Q5VVM6 HMGN2P3-201ENST00000433603 273 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 HMGN2P5-201ENST00000436882 273 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.56□□□□□ -2
CCDC30Q5VVM6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.56□□□□□ -2
CCDC30Q5VVM6 AC016632.1-201ENST00000503994 196 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.56□□□□□ -2
CCDC30Q5VVM6 AC022616.8-201ENST00000533569 253 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 AP000763.2-201ENST00000540641 163 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 AL158827.2-201ENST00000602494 330 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 AL034555.1-201ENST00000604816 211 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 AL691447.3-201ENST00000635020 330 ntBASIC2.56□□□□□ -2
CCDC30Q5VVM6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC30Q5VVM6 Y_RNA.256-201ENST00000364594 104 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 RNU4-56P-201ENST00000364700 142 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 RNU6-214P-201ENST00000384130 107 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 RNU6-611P-201ENST00000384276 104 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 SNORA51.11-201ENST00000384442 131 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 Y_RNA.573-201ENST00000384763 105 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 SNORD73A-201ENST00000386062 65 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 RNU2-32P-201ENST00000411193 191 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC30Q5VVM6 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.55□□□□□ -2
CCDC30Q5VVM6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.55□□□□□ -2
CCDC30Q5VVM6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.55□□□□□ -2
CCDC30Q5VVM6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.55□□□□□ -2
CCDC30Q5VVM6 HSPE1P4-201ENST00000550617 308 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 MIR5089-201ENST00000580047 84 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.55□□□□□ -2
CCDC30Q5VVM6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.55□□□□□ -2
CCDC30Q5VVM6 AC009318.2-201ENST00000610917 651 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 AL161423.1-201ENST00000613700 262 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 SNORD98-201ENST00000636377 67 ntBASIC2.55□□□□□ -2
CCDC30Q5VVM6 Y_RNA.450-201ENST00000384198 113 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 RNU2-48P-201ENST00000410694 191 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 RNU6-373P-201ENST00000411247 98 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 RNA5SP270-201ENST00000411361 118 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.54□□□□□ -2
CCDC30Q5VVM6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.54□□□□□ -2
CCDC30Q5VVM6 AL021397.1-201ENST00000451806 248 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.54□□□□□ -2
CCDC30Q5VVM6 HMGN2P26-201ENST00000463169 339 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 AC025033.1-201ENST00000463883 194 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 TRBVA-201ENST00000498804 316 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.54□□□□□ -2
CCDC30Q5VVM6 AC025423.5-201ENST00000550230 219 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 AC026271.5-201ENST00000577873 130 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 SNRPGP17-201ENST00000603780 214 ntBASIC2.54□□□□□ -2
CCDC30Q5VVM6 MTND4P23-201ENST00000447723 1363 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms