Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC007536.1-201ENST00000533382 349 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MIR5701-3-201ENST00000578890 82 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MIR5701-1-201ENST00000585138 82 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MIR5701-2-201ENST00000615634 82 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 U2.1-201ENST00000618978 145 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 RNU6-874P-201ENST00000362390 105 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.210-201ENST00000364161 110 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 U8.9-201ENST00000365667 134 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.512-201ENST00000384518 102 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 MIR1302-3-201ENST00000408128 138 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AC104332.2-201ENST00000429959 156 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 RPS15AP5-201ENST00000436276 388 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 Z82188.1-201ENST00000436709 154 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 RPL21P2-201ENST00000440049 481 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 IPO7P1-201ENST00000442031 636 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AL031659.1-201ENST00000447075 539 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 RN7SKP210-201ENST00000459176 261 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 VN1R91P-201ENST00000594377 169 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AC006111.3-201ENST00000622137 383 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AC138305.3-201ENST00000624988 240 ntBASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
CCDC178Q5BJE1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.106-201ENST00000363189 100 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.358-201ENST00000365491 99 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 SNORA12.2-201ENST00000391040 156 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 RNA5SP252-201ENST00000391131 119 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 RPL21P3-201ENST00000395517 478 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AL161651.1-201ENST00000440882 223 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AC146507.2-201ENST00000460608 476 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 RPL30P10-201ENST00000488148 337 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 RNU7-175P-201ENST00000515915 61 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 RNU5F-8P-201ENST00000515941 111 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.706-201ENST00000516933 99 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 ACA59.2-201ENST00000517061 156 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AC022616.4-201ENST00000522985 181 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AC009163.5-201ENST00000575421 637 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 MIR3149-201ENST00000584629 83 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 AC060766.3-201ENST00000591442 263 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 VN1R107P-201ENST00000601784 209 ntBASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC178Q5BJE1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 SET-203ENST00000372688 801 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 RNU6-505P-201ENST00000384427 107 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.504-201ENST00000384481 104 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 MIR190B-201ENST00000401119 79 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AL133475.1-201ENST00000404414 305 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 RN7SKP58-201ENST00000411010 305 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC114482.1-201ENST00000418010 247 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AL513124.1-201ENST00000450410 614 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 RN7SL75P-201ENST00000461926 281 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 RPL30P12-201ENST00000474666 353 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC010655.3-201ENST00000478818 450 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 RNU6-397P-201ENST00000516226 104 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 SNORA40.14-201ENST00000516543 86 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 SCARNA13-201ENST00000516672 275 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.715-201ENST00000517082 110 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 CR383656.8-201ENST00000549046 145 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC007375.1-201ENST00000554513 578 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC016727.2-201ENST00000603988 621 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 Z98751.3-201ENST00000604447 521 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AL121655.1-201ENST00000605811 308 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC100812.1-201ENST00000607622 580 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 AC004944.1-201ENST00000517807 3059 ntBASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC178Q5BJE1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.152-201ENST00000363578 100 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 RNU6-525P-201ENST00000363685 104 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 RNU6-708P-201ENST00000384217 107 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.574-201ENST00000384766 95 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 MIR887-201ENST00000401258 79 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.592-201ENST00000410274 109 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 AL139281.1-201ENST00000422120 335 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 AL139132.1-201ENST00000431587 344 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 AL031183.1-201ENST00000457667 207 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms