Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 TPTE2P5-203ENST00000458118 728 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC016632.1-201ENST00000503994 196 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AP005660.1-201ENST00000522972 293 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 CENPUP1-201ENST00000526649 1202 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC104383.1-201ENST00000530297 370 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.69□□□□□ -2.14
RAB40BQ12829 MIR3945-201ENST00000581853 98 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC243960.4-201ENST00000600532 288 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AL109918.3-201ENST00000603072 338 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AP001836.1-201ENST00000604675 523 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40BQ12829 AL158209.2-201ENST00000619266 216 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 MIR219B-201ENST00000637023 88 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40BQ12829 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40BQ12829 Y_RNA.99-201ENST00000363138 105 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU6-1164P-201ENST00000364428 107 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU4-66P-201ENST00000365199 138 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU6-259P-201ENST00000383999 107 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 Y_RNA.504-201ENST00000384481 104 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 MIR597-201ENST00000384968 97 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU11-3P-201ENST00000391111 133 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU2-66P-201ENST00000410650 161 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AL030996.1-201ENST00000411430 235 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 POLHP1-201ENST00000411806 470 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB40BQ12829 RPL23AP95-201ENST00000426806 265 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.68□□□□□ -2.14
RAB40BQ12829 AL445646.1-201ENST00000431784 216 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 HMGN2P3-201ENST00000433603 273 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.68□□□□□ -2.14
RAB40BQ12829 HMGN2P5-201ENST00000436882 273 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 MTND2P29-201ENST00000438595 412 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC096638.1-201ENST00000444678 216 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU6-261P-201ENST00000459506 102 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC091874.1-201ENST00000511402 339 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 RNU6-1038P-201ENST00000516516 104 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 HSPE1P18-201ENST00000517602 280 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.68□□□□□ -2.14
RAB40BQ12829 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.68□□□□□ -2.14
RAB40BQ12829 MIR4299-201ENST00000577899 72 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 MIR4648-201ENST00000580107 72 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC092747.3-201ENST00000603769 301 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC005034.5-201ENST00000604219 466 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.68□□□□□ -2.14
RAB40BQ12829 AL627230.6-201ENST00000611129 280 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 Z99129.1-201ENST00000612510 255 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC073534.2-201ENST00000620377 381 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 AC091932.3-201ENST00000624223 323 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
RAB40BQ12829 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
RAB40BQ12829 AC092881.1-201ENST00000638218 2733 ntBASIC1.68□□□□□ -2.14
RAB40BQ12829 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RAB40BQ12829 SNORA69-201ENST00000383895 132 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 Y_RNA.481-201ENST00000384373 102 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 SNORA26.3-201ENST00000391119 136 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AL023284.1-201ENST00000403956 276 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AL357139.1-201ENST00000407792 426 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RAB40BQ12829 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RAB40BQ12829 AL158823.1-201ENST00000418441 478 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40BQ12829 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40BQ12829 USP9YP14-201ENST00000430663 563 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AL133396.1-201ENST00000432048 687 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.67□□□□□ -2.14
RAB40BQ12829 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40BQ12829 MTCO2P3-201ENST00000442543 421 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.67□□□□□ -2.14
RAB40BQ12829 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.67□□□□□ -2.14
RAB40BQ12829 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40BQ12829 MTND1P29-201ENST00000448112 647 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 SRRM1P2-201ENST00000464531 1192 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.67□□□□□ -2.14
RAB40BQ12829 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 MIR3923-201ENST00000579521 83 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AC078795.3-201ENST00000602913 472 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 AC025754.2-201ENST00000606491 432 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
RAB40BQ12829 AC068792.1-201ENST00000621354 417 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RAB40BQ12829 OR5AK4P-201ENST00000635912 903 ntBASIC1.67□□□□□ -2.14
RAB40BQ12829 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RAB40BQ12829 ZNF355P-201ENST00000427301 3216 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RNU1-58P-201ENST00000362413 163 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RNU6-1085P-201ENST00000363576 107 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RNU6-82P-201ENST00000363970 107 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RNU6-38P-201ENST00000384085 107 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 MTCYBP2-201ENST00000407745 171 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RNU2-20P-201ENST00000410425 191 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 AP000275.1-201ENST00000411943 390 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40BQ12829 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40BQ12829 MTND2P22-201ENST00000444325 1033 ntBASIC1.66□□□□□ -2.14
RAB40BQ12829 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms