Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AP002906.1-201ENST00000603405 233 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 RNU6-212P-201ENST00000362642 104 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 RNU6-216P-201ENST00000363282 104 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 MIR329-1-201ENST00000385028 80 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 ARL5AP1-201ENST00000418991 388 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 AL590556.1-201ENST00000423231 483 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 LARP1BP3-201ENST00000437229 869 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.03□□□□□ -2.41
CPSF1Q10570 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.03□□□□□ -2.41
CPSF1Q10570 RPS26P48-201ENST00000491713 339 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.03□□□□□ -2.41
CPSF1Q10570 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.41
CPSF1Q10570 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.03□□□□□ -2.41
CPSF1Q10570 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.03□□□□□ -2.41
CPSF1Q10570 MIR4666A-201ENST00000580160 79 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 AC060771.1-201ENST00000582031 164 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 BNIP3P9-201ENST00000603714 553 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 AL031281.1-201ENST00000604049 488 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 AL356094.1-201ENST00000624663 1212 ntBASIC0.03□□□□□ -2.41
CPSF1Q10570 MIR340-201ENST00000362125 95 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 Y_RNA.518-201ENST00000384552 113 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 SNORA40C-201ENST00000391285 128 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 RPS3AP36-201ENST00000398190 775 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 RNA5SP25-201ENST00000410815 110 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.02□□□□□ -2.41
CPSF1Q10570 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.02□□□□□ -2.41
CPSF1Q10570 AC011233.1-201ENST00000422812 283 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.02□□□□□ -2.41
CPSF1Q10570 AL606517.1-201ENST00000446914 387 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AL162395.1-201ENST00000457882 422 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.02□□□□□ -2.41
CPSF1Q10570 HMGB1P30-201ENST00000492455 606 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.02□□□□□ -2.41
CPSF1Q10570 SNORA68.3-201ENST00000515906 83 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AC025627.3-201ENST00000582078 182 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AC068620.3-201ENST00000602749 560 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 AL358072.1-201ENST00000604156 575 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CPSF1Q10570 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.02□□□□□ -2.41
CPSF1Q10570 MIRLET7D-201ENST00000362263 87 ntBASIC0.01□□□□□ -2.41
CPSF1Q10570 SNORD99-201ENST00000408612 74 ntBASIC0.01□□□□□ -2.41
CPSF1Q10570 RNFT1P2-201ENST00000443064 757 ntBASIC0.01□□□□□ -2.41
CPSF1Q10570 AC023538.1-201ENST00000534576 736 ntBASIC0.01□□□□□ -2.41
CPSF1Q10570 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.01□□□□□ -2.41
CPSF1Q10570 AL445264.1-201ENST00000621719 171 ntBASIC0.01□□□□□ -2.41
CPSF1Q10570 SNORD3E-201ENST00000362899 217 ntBASIC0□□□□□ -2.41
CPSF1Q10570 SNORA4.3-201ENST00000365564 137 ntBASIC0□□□□□ -2.41
CPSF1Q10570 RNU6-166P-201ENST00000384371 107 ntBASIC0□□□□□ -2.41
CPSF1Q10570 SNORD89-201ENST00000390981 114 ntBASIC0□□□□□ -2.41
CPSF1Q10570 Z95118.1-201ENST00000421372 247 ntBASIC0□□□□□ -2.41
CPSF1Q10570 AC013262.1-201ENST00000426710 252 ntBASIC0□□□□□ -2.41
CPSF1Q10570 USP9YP14-201ENST00000430663 563 ntBASIC0□□□□□ -2.41
CPSF1Q10570 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0□□□□□ -2.41
CPSF1Q10570 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0□□□□□ -2.41
CPSF1Q10570 RPL39P36-201ENST00000490784 156 ntBASIC0□□□□□ -2.41
CPSF1Q10570 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
CPSF1Q10570 RPF2P2-201ENST00000504693 896 ntBASIC0□□□□□ -2.41
CPSF1Q10570 AP001189.2-201ENST00000527320 189 ntBASIC0□□□□□ -2.41
CPSF1Q10570 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
CPSF1Q10570 AL513534.2-201ENST00000603836 250 ntBASIC0□□□□□ -2.41
CPSF1Q10570 SNORD3E-202ENST00000627253 216 ntBASIC0□□□□□ -2.41
CPSF1Q10570 RNU6-353P-201ENST00000364266 108 ntBASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC138915.2-201ENST00000569776 97 ntBASIC-0.01□□□□□ -2.41
CPSF1Q10570 AC253576.2-201ENST00000618815 580 ntBASIC-0.01□□□□□ -2.41
CPSF1Q10570 MIR338-201ENST00000636369 67 ntBASIC-0.01□□□□□ -2.41
CPSF1Q10570 AL159152.1-201ENST00000635019 2587 ntBASIC-0.01□□□□□ -2.41
CPSF1Q10570 CASC19-280ENST00000642102 1351 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CPSF1Q10570 MTCO1P21-201ENST00000416634 589 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 AC016831.2-201ENST00000417179 352 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPSF1Q10570 AC091163.3-201ENST00000518269 1144 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 AL132657.2-201ENST00000564417 358 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 AC025678.1-201ENST00000567861 338 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 AC092354.1-201ENST00000606057 376 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 AL159153.1-201ENST00000619688 317 ntBASIC-0.02□□□□□ -2.41
CPSF1Q10570 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 RNU6-343P-201ENST00000364709 104 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 RNU6-549P-201ENST00000384433 107 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPSF1Q10570 SNRPEP8-201ENST00000442866 260 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 AL031313.1-201ENST00000448435 256 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 RNU7-90P-201ENST00000459216 62 ntBASIC-0.03□□□□□ -2.41
CPSF1Q10570 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.03□□□□□ -2.41
CPSF1Q10570 SNORA4.2-201ENST00000365313 147 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms