Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.23□□□□□ -2.21
TNFRSF9Q07011 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.23□□□□□ -2.21
TNFRSF9Q07011 RMST_4.1-201ENST00000616886 107 ntBASIC1.23□□□□□ -2.21
TNFRSF9Q07011 AC026585.1-201ENST00000619582 524 ntBASIC1.23□□□□□ -2.21
TNFRSF9Q07011 SCARNA4-202ENST00000625402 129 ntBASIC1.23□□□□□ -2.21
TNFRSF9Q07011 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.23□□□□□ -2.21
TNFRSF9Q07011 MIR3529-201ENST00000637713 78 ntBASIC1.23□□□□□ -2.21
TNFRSF9Q07011 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.23□□□□□ -2.21
TNFRSF9Q07011 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TNFRSF9Q07011 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TNFRSF9Q07011 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-661P-201ENST00000362409 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-37P-201ENST00000362692 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 Y_RNA.67-201ENST00000362870 100 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 SNORD56.1-201ENST00000362913 68 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 SNORD114-19-201ENST00000363072 75 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-11P-201ENST00000364234 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 Y_RNA.324-201ENST00000365165 102 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-25P-201ENST00000383873 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-1-201ENST00000383898 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-1103P-201ENST00000384150 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-48P-201ENST00000384161 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-36P-201ENST00000384172 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-4P-201ENST00000384205 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-5P-201ENST00000384238 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 U8.10-201ENST00000384260 133 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-622P-201ENST00000384272 103 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-3P-201ENST00000384314 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-1119P-201ENST00000384349 108 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-16P-201ENST00000384385 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-393P-201ENST00000384475 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-15P-201ENST00000384534 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-1127P-201ENST00000384580 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-2-201ENST00000384627 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-29P-201ENST00000384637 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-9-201ENST00000384776 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-33P-201ENST00000384793 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 MIR29C-201ENST00000385231 88 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 SNORA16.2-201ENST00000390991 127 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 FGF7P8-201ENST00000402994 292 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU4-46P-201ENST00000410818 138 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 BTF3P4-201ENST00000418852 495 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 MTCYBP8-201ENST00000422855 651 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TNFRSF9Q07011 MTCO2P19-201ENST00000427513 598 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC012308.1-201ENST00000451232 178 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AMD1P1-201ENST00000457220 922 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 SCARNA18-201ENST00000459004 134 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RPS3AP17-201ENST00000472594 777 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC079382.1-201ENST00000493346 557 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC108078.1-201ENST00000508073 725 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 MTCYBP40-201ENST00000509390 1135 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC091133.4-201ENST00000511142 308 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-1053P-201ENST00000515930 101 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AL713866.2-201ENST00000603579 219 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 RNU6-6P-201ENST00000606623 107 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC096772.1-201ENST00000609146 564 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 AC008121.3-201ENST00000618726 433 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 uc_338.11-201ENST00000619132 160 ntBASIC1.22□□□□□ -2.21
TNFRSF9Q07011 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.40-201ENST00000362645 93 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU6-1010P-201ENST00000362757 107 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU6-552P-201ENST00000362869 119 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU6-78P-201ENST00000362897 107 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU1-42P-201ENST00000364033 160 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.296-201ENST00000364930 108 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU5A-6P-201ENST00000384136 116 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU1-57P-201ENST00000384491 166 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 MIR186-201ENST00000384988 86 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.582-201ENST00000391023 95 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU6-1158P-201ENST00000391167 107 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RAP1BP3-201ENST00000407180 549 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU2-29P-201ENST00000410423 189 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC073464.1-201ENST00000429823 534 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC002486.1-201ENST00000435098 391 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 Z83846.1-201ENST00000446798 265 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 MTND1P29-201ENST00000448112 647 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AL356010.1-201ENST00000456364 102 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RPL30P12-201ENST00000474666 353 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC010493.1-201ENST00000513479 292 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RNU2-69P-201ENST00000516061 100 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFRSF9Q07011 MIR5583-1-201ENST00000580941 59 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 MIR4422-201ENST00000581938 83 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 RPL30P11-203ENST00000598995 310 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 Z99129.1-201ENST00000612510 255 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms