Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.7□□□□□ -1.98
LTBQ06643 RPL37P4-201ENST00000448908 268 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.7□□□□□ -1.98
LTBQ06643 AC117440.1-201ENST00000474107 571 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AP004217.1-201ENST00000480579 346 ntBASIC2.7□□□□□ -1.98
LTBQ06643 RPL30P14-201ENST00000482744 348 ntBASIC2.7□□□□□ -1.98
LTBQ06643 SNORA40.14-201ENST00000516543 86 ntBASIC2.7□□□□□ -1.98
LTBQ06643 RNU6-1282P-201ENST00000516735 96 ntBASIC2.7□□□□□ -1.98
LTBQ06643 RNU7-4P-201ENST00000516961 62 ntBASIC2.7□□□□□ -1.98
LTBQ06643 Y_RNA.715-201ENST00000517082 110 ntBASIC2.7□□□□□ -1.98
LTBQ06643 RNU6-711P-201ENST00000517255 106 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.7□□□□□ -1.98
LTBQ06643 MYL12BP1-201ENST00000569826 507 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AC004584.2-201ENST00000570407 410 ntBASIC2.7□□□□□ -1.98
LTBQ06643 MIR4782-201ENST00000577987 79 ntBASIC2.7□□□□□ -1.98
LTBQ06643 Z98751.3-201ENST00000604447 521 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AC009318.2-201ENST00000610917 651 ntBASIC2.7□□□□□ -1.98
LTBQ06643 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LTBQ06643 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.69□□□□□ -1.98
LTBQ06643 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
LTBQ06643 RNU6-874P-201ENST00000362390 105 ntBASIC2.69□□□□□ -1.98
LTBQ06643 RNU6-778P-201ENST00000363269 103 ntBASIC2.69□□□□□ -1.98
LTBQ06643 RNU6-898P-201ENST00000365627 104 ntBASIC2.69□□□□□ -1.98
LTBQ06643 MIR518D-201ENST00000385014 87 ntBASIC2.69□□□□□ -1.98
LTBQ06643 MIR625-201ENST00000385047 85 ntBASIC2.69□□□□□ -1.98
LTBQ06643 MIR504-201ENST00000385065 83 ntBASIC2.69□□□□□ -1.98
LTBQ06643 RPL21P1-201ENST00000399532 476 ntBASIC2.69□□□□□ -1.98
LTBQ06643 MIR887-201ENST00000401258 79 ntBASIC2.69□□□□□ -1.98
LTBQ06643 RPS29P13-201ENST00000402041 169 ntBASIC2.69□□□□□ -1.98
LTBQ06643 RNA5SP184-201ENST00000411071 108 ntBASIC2.69□□□□□ -1.98
LTBQ06643 RPL21P40-201ENST00000428586 483 ntBASIC2.69□□□□□ -1.98
LTBQ06643 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.69□□□□□ -1.98
LTBQ06643 AC098831.1-201ENST00000440661 216 ntBASIC2.69□□□□□ -1.98
LTBQ06643 DYNLT3P2-201ENST00000442517 295 ntBASIC2.69□□□□□ -1.98
LTBQ06643 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.69□□□□□ -1.98
LTBQ06643 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.69□□□□□ -1.98
LTBQ06643 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.69□□□□□ -1.98
LTBQ06643 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.69□□□□□ -1.98
LTBQ06643 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.69□□□□□ -1.98
LTBQ06643 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.69□□□□□ -1.98
LTBQ06643 AC016727.2-201ENST00000603988 621 ntBASIC2.69□□□□□ -1.98
LTBQ06643 AC107871.2-201ENST00000612894 502 ntBASIC2.69□□□□□ -1.98
LTBQ06643 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.69□□□□□ -1.98
LTBQ06643 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LTBQ06643 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
LTBQ06643 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.69□□□□□ -1.98
LTBQ06643 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.69□□□□□ -1.98
LTBQ06643 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LTBQ06643 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
LTBQ06643 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
LTBQ06643 RNU6-942P-201ENST00000363002 107 ntBASIC2.68□□□□□ -1.98
LTBQ06643 RNU6-884P-201ENST00000363889 107 ntBASIC2.68□□□□□ -1.98
LTBQ06643 Y_RNA.214-201ENST00000364201 112 ntBASIC2.68□□□□□ -1.98
LTBQ06643 Y_RNA.222-201ENST00000364264 102 ntBASIC2.68□□□□□ -1.98
LTBQ06643 RNU6-1318P-201ENST00000365389 103 ntBASIC2.68□□□□□ -1.98
LTBQ06643 SNORA63.7-201ENST00000365579 123 ntBASIC2.68□□□□□ -1.98
LTBQ06643 RNU6-708P-201ENST00000384217 107 ntBASIC2.68□□□□□ -1.98
LTBQ06643 RNU6-658P-201ENST00000384606 106 ntBASIC2.68□□□□□ -1.98
LTBQ06643 MT-TG-201ENST00000387429 68 ntBASIC2.68□□□□□ -1.98
LTBQ06643 RN7SKP123-201ENST00000410732 291 ntBASIC2.68□□□□□ -1.98
LTBQ06643 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
LTBQ06643 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.68□□□□□ -1.98
LTBQ06643 TRIAP1P1-201ENST00000427062 225 ntBASIC2.68□□□□□ -1.98
LTBQ06643 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.68□□□□□ -1.98
LTBQ06643 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.68□□□□□ -1.98
LTBQ06643 PCNPP5-201ENST00000452246 481 ntBASIC2.68□□□□□ -1.98
LTBQ06643 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.68□□□□□ -1.98
LTBQ06643 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.68□□□□□ -1.98
LTBQ06643 RNA5SP367-201ENST00000516557 118 ntBASIC2.68□□□□□ -1.98
LTBQ06643 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.68□□□□□ -1.98
LTBQ06643 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.68□□□□□ -1.98
LTBQ06643 LINC00933-203ENST00000559812 219 ntBASIC2.68□□□□□ -1.98
LTBQ06643 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.68□□□□□ -1.98
LTBQ06643 MIR4319-201ENST00000577285 85 ntBASIC2.68□□□□□ -1.98
LTBQ06643 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LTBQ06643 VN1R91P-201ENST00000594377 169 ntBASIC2.68□□□□□ -1.98
LTBQ06643 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.68□□□□□ -1.98
LTBQ06643 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
LTBQ06643 AC007792.1-201ENST00000623023 402 ntBASIC2.68□□□□□ -1.98
LTBQ06643 AC027309.3-201ENST00000623419 351 ntBASIC2.68□□□□□ -1.98
LTBQ06643 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
LTBQ06643 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
LTBQ06643 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
LTBQ06643 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LTBQ06643 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LTBQ06643 Y_RNA.26-201ENST00000362539 101 ntBASIC2.67□□□□□ -1.98
LTBQ06643 RNU6-227P-201ENST00000362865 103 ntBASIC2.67□□□□□ -1.98
LTBQ06643 Y_RNA.123-201ENST00000363338 102 ntBASIC2.67□□□□□ -1.98
LTBQ06643 Y_RNA.188-201ENST00000363952 111 ntBASIC2.67□□□□□ -1.98
LTBQ06643 SNORA14A-201ENST00000364773 135 ntBASIC2.67□□□□□ -1.98
LTBQ06643 Y_RNA.396-201ENST00000383949 103 ntBASIC2.67□□□□□ -1.98
LTBQ06643 RNU6-784P-201ENST00000384330 106 ntBASIC2.67□□□□□ -1.98
LTBQ06643 RNU6-700P-201ENST00000391043 107 ntBASIC2.67□□□□□ -1.98
LTBQ06643 RNU1-101P-201ENST00000391171 127 ntBASIC2.67□□□□□ -1.98
LTBQ06643 U3.37-201ENST00000408528 213 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AL513477.1-202ENST00000417061 214 ntBASIC2.67□□□□□ -1.98
LTBQ06643 ELOCP20-201ENST00000422460 345 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AC003685.2-201ENST00000422795 395 ntBASIC2.67□□□□□ -1.98
LTBQ06643 MTCO3P29-201ENST00000432119 779 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms