Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-9-201ENST00000384776 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-33P-201ENST00000384793 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 SNORA12-201ENST00000391162 147 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RPL23AP95-201ENST00000426806 265 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AL445305.1-201ENST00000432577 575 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AC104982.1-201ENST00000478775 574 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-6P-201ENST00000606623 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AL355816.2-201ENST00000610049 647 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 AL360219.1-201ENST00000610230 366 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 GHRLOS.1-201ENST00000610995 70 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-1335P-201ENST00000365426 107 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 SNORA16.2-201ENST00000390991 127 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 RNU1-139P-201ENST00000391307 165 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 FCF1P10-201ENST00000407590 479 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AL596276.1-201ENST00000434465 418 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AL122001.1-201ENST00000457027 370 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST1H1AQ02539 SUMO2P5-201ENST00000506790 245 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 RNU6-150P-201ENST00000516237 95 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 SNORA43.2-201ENST00000516652 128 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.11□□□□□ -2.39
HIST1H1AQ02539 MIR3136-201ENST00000583498 78 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AL138889.2-201ENST00000603883 242 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AC022893.3-201ENST00000607665 437 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 AL589743.1-201ENST00000551932 2712 ntBASIC0.11□□□□□ -2.39
HIST1H1AQ02539 MTND5P33-201ENST00000571250 1450 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNU6-37P-201ENST00000362692 107 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 SNORD56.1-201ENST00000362913 68 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNU6-11P-201ENST00000364234 107 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNY1P14-201ENST00000384426 108 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 SNORA12.2-201ENST00000391040 156 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 MIR1305-201ENST00000408300 86 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 MIR1287-201ENST00000408492 90 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RPEP5-201ENST00000441137 268 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNU7-90P-201ENST00000459216 62 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNU7-21P-201ENST00000459430 62 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AC092991.1-201ENST00000477176 376 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNA5SP436-201ENST00000516020 115 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 RNU6-677P-201ENST00000516914 101 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AP003355.1-201ENST00000518956 587 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AC025627.3-201ENST00000582078 182 ntBASIC0.1□□□□□ -2.39
HIST1H1AQ02539 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
HIST1H1AQ02539 MIRLET7D-201ENST00000362263 87 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 RNU4-15P-201ENST00000362613 141 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 RNU6-278P-201ENST00000390945 109 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 RNA5SP511-201ENST00000410487 115 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 BX664727.1-201ENST00000416024 466 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AC002486.1-201ENST00000435098 391 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 NFU1P2-201ENST00000448700 469 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 ZNF886P-201ENST00000450781 723 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AC007395.1-201ENST00000451333 677 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 ART2BP-201ENST00000453501 499 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST1H1AQ02539 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST1H1AQ02539 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AC108740.1-201ENST00000498629 225 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST1H1AQ02539 DEFB131D-201ENST00000526803 184 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 DEFB108A-201ENST00000530110 222 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.09□□□□□ -2.4
HIST1H1AQ02539 SNORA59B-202ENST00000578183 701 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 MIR4742-201ENST00000581069 85 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AL022154.1-201ENST00000604698 785 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AL034555.1-201ENST00000604816 211 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 RMST_2.1-201ENST00000617263 136 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 AC008147.4-201ENST00000617570 1204 ntBASIC0.09□□□□□ -2.4
HIST1H1AQ02539 Y_RNA.226-201ENST00000364337 114 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 SNORD31B-201ENST00000364977 69 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 MIR10A-201ENST00000385043 110 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 MIR216A-201ENST00000385063 110 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 SNORD99-201ENST00000408612 74 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AC016925.1-201ENST00000458303 298 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AC022447.4-201ENST00000504053 364 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 RNU6-1102P-201ENST00000516149 96 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AL132657.2-201ENST00000564417 358 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms