Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CX3CL1P78423 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CX3CL1P78423 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CX3CL1P78423 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CX3CL1P78423 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.21□□□□□ -2.06
CX3CL1P78423 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.21□□□□□ -2.06
CX3CL1P78423 MIR26A1-201ENST00000362205 77 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 RNU4-56P-201ENST00000364700 142 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 RNU6-596P-201ENST00000365395 98 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 SNORA18.3-201ENST00000384122 132 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 SNORA29-201ENST00000384183 140 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 MIR29B2-201ENST00000385055 81 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AL591034.2-201ENST00000402839 359 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 RNU6-174P-201ENST00000410406 106 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 HMGB3P2-201ENST00000411913 584 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 HMGN2P35-201ENST00000412164 270 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 EIF4EP2-201ENST00000422816 654 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.21□□□□□ -2.06
CX3CL1P78423 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AC003982.1-202ENST00000469928 248 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 FO393415.2-201ENST00000480085 343 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AC021146.2-201ENST00000504736 556 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 Y_RNA.670-201ENST00000516255 105 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.21□□□□□ -2.06
CX3CL1P78423 AC005000.2-201ENST00000605468 310 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 AC008121.3-201ENST00000618726 433 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 AL137790.1-201ENST00000634283 177 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 MIR1302-1-201ENST00000637932 143 ntBASIC2.21□□□□□ -2.06
CX3CL1P78423 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CX3CL1P78423 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.21□□□□□ -2.06
CX3CL1P78423 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CX3CL1P78423 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CX3CL1P78423 KPNA2P1-201ENST00000458289 1591 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC069528.2-201ENST00000624849 1991 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 RNU1-23P-201ENST00000363361 144 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 SNORA25.6-201ENST00000364121 118 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 RNA5SP240-201ENST00000365355 128 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.2□□□□□ -2.06
CX3CL1P78423 Y_RNA.529-201ENST00000384586 119 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 MIR483-201ENST00000385070 76 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 RNU6-1050P-201ENST00000410388 107 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AL135938.1-201ENST00000443141 297 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AL513124.1-201ENST00000450410 614 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 snoU13.6-201ENST00000458785 104 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AF186996.7-201ENST00000492781 209 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC145146.1-201ENST00000496370 254 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CX3CL1P78423 FGF7P4-201ENST00000509595 295 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC005741.1-201ENST00000511094 432 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 SNORA48.11-201ENST00000517015 89 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.2□□□□□ -2.06
CX3CL1P78423 RPS3AP23-202ENST00000574601 686 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AL356575.1-201ENST00000603008 283 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC113139.1-201ENST00000605049 239 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AP000654.2-201ENST00000605633 586 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC009229.3-201ENST00000608056 282 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC135507.2-201ENST00000612443 309 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC063943.3-201ENST00000615562 356 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 AC098657.3-201ENST00000620434 263 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 MTND5P9-201ENST00000503854 1755 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CX3CL1P78423 AC233981.2-201ENST00000611524 1614 ntBASIC2.2□□□□□ -2.06
CX3CL1P78423 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.19□□□□□ -2.06
CX3CL1P78423 RNU5B-2P-201ENST00000363036 113 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RNU6-944P-201ENST00000364023 107 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RNU5E-4P-201ENST00000364931 120 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RNU6-867P-201ENST00000364956 107 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RNA5SP201-201ENST00000410316 124 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RNU6-370P-201ENST00000411008 104 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.19□□□□□ -2.06
CX3CL1P78423 AC087499.2-201ENST00000432861 149 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.19□□□□□ -2.06
CX3CL1P78423 RPL7P42-201ENST00000481005 679 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.19□□□□□ -2.06
CX3CL1P78423 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.19□□□□□ -2.06
CX3CL1P78423 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.19□□□□□ -2.06
CX3CL1P78423 RNA5SP367-201ENST00000516557 118 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 RNU6-567P-201ENST00000516746 107 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 Y_RNA.708-201ENST00000516950 96 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.19□□□□□ -2.06
CX3CL1P78423 CYP4A27P-201ENST00000567218 190 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 MIR4658-201ENST00000584344 65 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms