Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-212P-201ENST00000362642 104 ntBASIC2.79□□□□□ -1.96
RAE1P78406 SNORA71.1-201ENST00000364523 117 ntBASIC2.79□□□□□ -1.96
RAE1P78406 RNU6-1083P-201ENST00000384022 107 ntBASIC2.79□□□□□ -1.96
RAE1P78406 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
RAE1P78406 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
RAE1P78406 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.79□□□□□ -1.96
RAE1P78406 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.79□□□□□ -1.96
RAE1P78406 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.79□□□□□ -1.96
RAE1P78406 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.79□□□□□ -1.96
RAE1P78406 CHEK2P4-201ENST00000450340 246 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AL353752.1-201ENST00000454946 260 ntBASIC2.79□□□□□ -1.96
RAE1P78406 RPL7P49-201ENST00000471402 708 ntBASIC2.79□□□□□ -1.96
RAE1P78406 SNORA40.14-201ENST00000516543 86 ntBASIC2.79□□□□□ -1.96
RAE1P78406 RNU6-1137P-201ENST00000517073 99 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AC093331.1-201ENST00000521474 169 ntBASIC2.79□□□□□ -1.96
RAE1P78406 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.79□□□□□ -1.96
RAE1P78406 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.79□□□□□ -1.96
RAE1P78406 AC073410.2-201ENST00000603240 332 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AC137590.2-201ENST00000619709 240 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AC092435.3-201ENST00000565538 3654 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AC093010.3-201ENST00000570269 15214 ntBASIC2.79□□□□□ -1.96
RAE1P78406 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.79□□□□□ -1.96
RAE1P78406 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC099654.7-201ENST00000635788 2127 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.78□□□□□ -1.96
RAE1P78406 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
RAE1P78406 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.78□□□□□ -1.96
RAE1P78406 Y_RNA.40-201ENST00000362645 93 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RNU1-35P-201ENST00000362782 153 ntBASIC2.78□□□□□ -1.96
RAE1P78406 SNORA38.1-201ENST00000364172 131 ntBASIC2.78□□□□□ -1.96
RAE1P78406 SNORA36A-201ENST00000384221 132 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RNU6-17P-201ENST00000384245 107 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RNU6-18P-201ENST00000384527 107 ntBASIC2.78□□□□□ -1.96
RAE1P78406 MIR153-2-201ENST00000385225 87 ntBASIC2.78□□□□□ -1.96
RAE1P78406 SNORA69.1-201ENST00000390904 137 ntBASIC2.78□□□□□ -1.96
RAE1P78406 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RAE1P78406 AL512633.1-201ENST00000399931 655 ntBASIC2.78□□□□□ -1.96
RAE1P78406 Y_RNA.605-201ENST00000410577 105 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RN7SKP58-201ENST00000411010 305 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC113618.1-201ENST00000416747 285 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AL590135.1-201ENST00000422215 156 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC019205.3-201ENST00000424573 156 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.78□□□□□ -1.96
RAE1P78406 AC016700.2-201ENST00000446011 156 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC015911.1-201ENST00000495111 156 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AIG1P1-201ENST00000503376 148 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RNU6-911P-201ENST00000516523 104 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RNU6-567P-201ENST00000516746 107 ntBASIC2.78□□□□□ -1.96
RAE1P78406 RN7SKP272-201ENST00000516988 232 ntBASIC2.78□□□□□ -1.96
RAE1P78406 SCARNA11.3-201ENST00000517276 130 ntBASIC2.78□□□□□ -1.96
RAE1P78406 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.78□□□□□ -1.96
RAE1P78406 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.78□□□□□ -1.96
RAE1P78406 MIR3136-201ENST00000583498 78 ntBASIC2.78□□□□□ -1.96
RAE1P78406 VN1R91P-201ENST00000594377 169 ntBASIC2.78□□□□□ -1.96
RAE1P78406 AC243829.7-201ENST00000633081 225 ntBASIC2.78□□□□□ -1.96
RAE1P78406 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RAE1P78406 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RAE1P78406 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RAE1P78406 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.78□□□□□ -1.96
RAE1P78406 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.78□□□□□ -1.97
RAE1P78406 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.97
RAE1P78406 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RAE1P78406 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RAE1P78406 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RAE1P78406 RNY3P11-201ENST00000364153 102 ntBASIC2.77□□□□□ -1.97
RAE1P78406 U3.13-201ENST00000364804 214 ntBASIC2.77□□□□□ -1.97
RAE1P78406 Y_RNA.645-201ENST00000391229 102 ntBASIC2.77□□□□□ -1.97
RAE1P78406 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.77□□□□□ -1.97
RAE1P78406 RNU6-985P-201ENST00000410182 104 ntBASIC2.77□□□□□ -1.97
RAE1P78406 Y_RNA.592-201ENST00000410274 109 ntBASIC2.77□□□□□ -1.97
RAE1P78406 RPS26P42-201ENST00000413485 326 ntBASIC2.77□□□□□ -1.97
RAE1P78406 MTND5P22-201ENST00000458380 195 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC112771.1-201ENST00000463581 102 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
RAE1P78406 RPL36AP48-201ENST00000485521 314 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC021146.2-201ENST00000504736 556 ntBASIC2.77□□□□□ -1.97
RAE1P78406 SNORA31.16-201ENST00000516773 139 ntBASIC2.77□□□□□ -1.97
RAE1P78406 Y_RNA.720-201ENST00000517166 92 ntBASIC2.77□□□□□ -1.97
RAE1P78406 Y_RNA.721-201ENST00000517207 102 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.77□□□□□ -1.97
RAE1P78406 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RAE1P78406 AC006600.1-201ENST00000572529 153 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC008737.2-201ENST00000599446 118 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC136443.5-201ENST00000603741 370 ntBASIC2.77□□□□□ -1.97
RAE1P78406 Z98751.3-201ENST00000604447 521 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.77□□□□□ -1.97
RAE1P78406 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.77□□□□□ -1.97
RAE1P78406 U2.1-201ENST00000618978 145 ntBASIC2.77□□□□□ -1.97
RAE1P78406 AL162373.1-201ENST00000620433 407 ntBASIC2.77□□□□□ -1.97
RAE1P78406 SNORD98-201ENST00000636377 67 ntBASIC2.77□□□□□ -1.97
RAE1P78406 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.77□□□□□ -1.97
RAE1P78406 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.77□□□□□ -1.97
RAE1P78406 AC091812.1-201ENST00000432235 1948 ntBASIC2.76□□□□□ -1.97
RAE1P78406 RNU6-529P-201ENST00000363383 104 ntBASIC2.76□□□□□ -1.97
RAE1P78406 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
RAE1P78406 Y_RNA.455-201ENST00000384230 98 ntBASIC2.76□□□□□ -1.97
RAE1P78406 RNU1-57P-201ENST00000384491 166 ntBASIC2.76□□□□□ -1.97
RAE1P78406 MIR23B-201ENST00000384832 97 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms