Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 DEFB131E-202ENST00000602581 683 ntBASIC0.09□□□□□ -2.4
RPS28P62857 CTHRC1P1-201ENST00000605383 469 ntBASIC0.09□□□□□ -2.4
RPS28P62857 7SK.10-201ENST00000621414 298 ntBASIC0.09□□□□□ -2.4
RPS28P62857 AL359740.1-201ENST00000624340 592 ntBASIC0.09□□□□□ -2.4
RPS28P62857 MIR338-201ENST00000636369 67 ntBASIC0.09□□□□□ -2.4
RPS28P62857 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
RPS28P62857 U3.9-201ENST00000363823 204 ntBASIC0.08□□□□□ -2.4
RPS28P62857 RNU6-457P-201ENST00000363999 107 ntBASIC0.08□□□□□ -2.4
RPS28P62857 RNU4-76P-201ENST00000364509 141 ntBASIC0.08□□□□□ -2.4
RPS28P62857 RNA5SP109-201ENST00000391010 116 ntBASIC0.08□□□□□ -2.4
RPS28P62857 SNORA75.2-201ENST00000391138 150 ntBASIC0.08□□□□□ -2.4
RPS28P62857 SNORA75.3-201ENST00000391231 150 ntBASIC0.08□□□□□ -2.4
RPS28P62857 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
RPS28P62857 RNA5SP222-201ENST00000411039 105 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AL590135.1-201ENST00000422215 156 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.08□□□□□ -2.4
RPS28P62857 AC019205.3-201ENST00000424573 156 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AC010154.1-201ENST00000425857 269 ntBASIC0.08□□□□□ -2.4
RPS28P62857 UBE2D3P3-201ENST00000426992 425 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.08□□□□□ -2.4
RPS28P62857 RPL23AP30-201ENST00000432419 501 ntBASIC0.08□□□□□ -2.4
RPS28P62857 DAP3P1-201ENST00000441522 278 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AC016700.2-201ENST00000446011 156 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AC015911.1-201ENST00000495111 156 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.08□□□□□ -2.4
RPS28P62857 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.08□□□□□ -2.4
RPS28P62857 TPRKBP2-201ENST00000565969 475 ntBASIC0.08□□□□□ -2.4
RPS28P62857 MIR3146-201ENST00000580367 79 ntBASIC0.08□□□□□ -2.4
RPS28P62857 AC131159.1-201ENST00000621854 213 ntBASIC0.08□□□□□ -2.4
RPS28P62857 SNORA33-201ENST00000363664 130 ntBASIC0.07□□□□□ -2.4
RPS28P62857 RNU6-384P-201ENST00000364900 104 ntBASIC0.07□□□□□ -2.4
RPS28P62857 RNU6-1080P-201ENST00000383982 107 ntBASIC0.07□□□□□ -2.4
RPS28P62857 Y_RNA.578-201ENST00000390903 88 ntBASIC0.07□□□□□ -2.4
RPS28P62857 RN7SKP266-201ENST00000410232 287 ntBASIC0.07□□□□□ -2.4
RPS28P62857 HIGD1AP15-201ENST00000416198 280 ntBASIC0.07□□□□□ -2.4
RPS28P62857 AC000111.3-201ENST00000433478 193 ntBASIC0.07□□□□□ -2.4
RPS28P62857 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.07□□□□□ -2.4
RPS28P62857 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.07□□□□□ -2.4
RPS28P62857 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
RPS28P62857 AC109445.1-201ENST00000512356 383 ntBASIC0.07□□□□□ -2.4
RPS28P62857 AC087883.1-201ENST00000551882 391 ntBASIC0.07□□□□□ -2.4
RPS28P62857 AC080078.3-201ENST00000605407 463 ntBASIC0.07□□□□□ -2.4
RPS28P62857 AL603839.4-201ENST00000624658 1005 ntBASIC0.07□□□□□ -2.4
RPS28P62857 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.07□□□□□ -2.4
RPS28P62857 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
RPS28P62857 SNORD89-201ENST00000390981 114 ntBASIC0.06□□□□□ -2.4
RPS28P62857 RNA5SP323-201ENST00000391094 133 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AL034345.1-201ENST00000407768 123 ntBASIC0.06□□□□□ -2.4
RPS28P62857 RNU4-62P-201ENST00000410125 130 ntBASIC0.06□□□□□ -2.4
RPS28P62857 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.06□□□□□ -2.4
RPS28P62857 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.06□□□□□ -2.4
RPS28P62857 MTND5P2-201ENST00000442927 1142 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.06□□□□□ -2.4
RPS28P62857 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.06□□□□□ -2.4
RPS28P62857 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.06□□□□□ -2.4
RPS28P62857 AC021146.8-201ENST00000507455 733 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AC113347.3-201ENST00000509113 148 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AC027338.1-201ENST00000514840 825 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.06□□□□□ -2.4
RPS28P62857 SUB1P2-201ENST00000556401 297 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AL357312.1-201ENST00000603879 298 ntBASIC0.06□□□□□ -2.4
RPS28P62857 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RPS28P62857 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.06□□□□□ -2.4
RPS28P62857 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.06□□□□□ -2.4
RPS28P62857 AL359547.2-201ENST00000615810 418 ntBASIC0.06□□□□□ -2.4
RPS28P62857 AC103706.2-201ENST00000638080 240 ntBASIC0.06□□□□□ -2.4
RPS28P62857 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RPS28P62857 Y_RNA.333-201ENST00000365274 102 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RNU6-609P-201ENST00000365459 107 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RNY3P13-201ENST00000365542 102 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RNU6-163P-201ENST00000384396 106 ntBASIC0.05□□□□□ -2.4
RPS28P62857 SNORD41-201ENST00000386967 70 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RPS20P2-201ENST00000402520 389 ntBASIC0.05□□□□□ -2.4
RPS28P62857 AL451046.2-201ENST00000403074 277 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RNU2-62P-201ENST00000410868 191 ntBASIC0.05□□□□□ -2.4
RPS28P62857 HMGN1P14-201ENST00000412459 517 ntBASIC0.05□□□□□ -2.4
RPS28P62857 Z82205.1-201ENST00000428456 297 ntBASIC0.05□□□□□ -2.4
RPS28P62857 AC092628.1-201ENST00000436250 252 ntBASIC0.05□□□□□ -2.4
RPS28P62857 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.05□□□□□ -2.4
RPS28P62857 AL133217.1-201ENST00000450980 425 ntBASIC0.05□□□□□ -2.4
RPS28P62857 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.05□□□□□ -2.4
RPS28P62857 U7.7-201ENST00000459276 60 ntBASIC0.05□□□□□ -2.4
RPS28P62857 SNORA70.12-201ENST00000516084 153 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RNU6-334P-201ENST00000517072 102 ntBASIC0.05□□□□□ -2.4
RPS28P62857 AP002453.2-201ENST00000533503 320 ntBASIC0.05□□□□□ -2.4
RPS28P62857 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.05□□□□□ -2.4
RPS28P62857 AC011195.1-201ENST00000578177 177 ntBASIC0.05□□□□□ -2.4
RPS28P62857 MIR3923-201ENST00000579521 83 ntBASIC0.05□□□□□ -2.4
RPS28P62857 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.05□□□□□ -2.4
RPS28P62857 AC243829.6-201ENST00000612652 106 ntBASIC0.05□□□□□ -2.4
RPS28P62857 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.05□□□□□ -2.4
RPS28P62857 RMST_7.1-201ENST00000621935 268 ntBASIC0.05□□□□□ -2.4
RPS28P62857 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.05□□□□□ -2.4
RPS28P62857 BX322639.1-202ENST00000423987 2213 ntBASIC0.04□□□□□ -2.4
RPS28P62857 snoU2-30.2-201ENST00000362805 70 ntBASIC0.04□□□□□ -2.4
RPS28P62857 RNU1-17P-201ENST00000363022 152 ntBASIC0.04□□□□□ -2.4
RPS28P62857 RNU5E-6P-201ENST00000365574 115 ntBASIC0.04□□□□□ -2.4
RPS28P62857 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
RPS28P62857 RNU6-418P-201ENST00000384035 107 ntBASIC0.04□□□□□ -2.4
RPS28P62857 MIR216A-201ENST00000385063 110 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms