Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.59□□□□□ -1.99
SEC61A1P61619 Z82188.1-201ENST00000436709 154 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 AC009296.1-201ENST00000443146 155 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 AC112492.4-201ENST00000456549 352 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.59□□□□□ -1.99
SEC61A1P61619 RPL27AP5-201ENST00000469428 449 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 MTND4LP22-201ENST00000508209 276 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.59□□□□□ -1.99
SEC61A1P61619 MRPS36P2-201ENST00000512569 299 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 RNU6-635P-201ENST00000516651 102 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 NACAP3-201ENST00000552100 481 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.59□□□□□ -1.99
SEC61A1P61619 MIR4503-201ENST00000582187 83 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 AC124312.5-201ENST00000604451 268 ntBASIC2.59□□□□□ -1.99
SEC61A1P61619 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SEC61A1P61619 AC110774.1-201ENST00000623567 2018 ntBASIC2.59□□□□□ -2
SEC61A1P61619 AL035425.3-201ENST00000564206 4996 ntBASIC2.59□□□□□ -2
SEC61A1P61619 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.58□□□□□ -2
SEC61A1P61619 Y_RNA.47-201ENST00000362697 108 ntBASIC2.58□□□□□ -2
SEC61A1P61619 Y_RNA.106-201ENST00000363189 100 ntBASIC2.58□□□□□ -2
SEC61A1P61619 RNU6-708P-201ENST00000384217 107 ntBASIC2.58□□□□□ -2
SEC61A1P61619 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
SEC61A1P61619 RNU6-505P-201ENST00000384427 107 ntBASIC2.58□□□□□ -2
SEC61A1P61619 SNORD15B-201ENST00000384714 146 ntBASIC2.58□□□□□ -2
SEC61A1P61619 RNU6-700P-201ENST00000391043 107 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AL133475.1-201ENST00000404414 305 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AP000275.1-201ENST00000411943 390 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AC074117.2-201ENST00000417130 397 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AC007098.1-201ENST00000420122 367 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.58□□□□□ -2
SEC61A1P61619 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.58□□□□□ -2
SEC61A1P61619 RPS29P6-201ENST00000438196 145 ntBASIC2.58□□□□□ -2
SEC61A1P61619 IPO7P1-201ENST00000442031 636 ntBASIC2.58□□□□□ -2
SEC61A1P61619 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.58□□□□□ -2
SEC61A1P61619 RNU7-4P-201ENST00000516961 62 ntBASIC2.58□□□□□ -2
SEC61A1P61619 RN7SKP272-201ENST00000516988 232 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AL590705.4-201ENST00000532209 134 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AL133393.1-201ENST00000603277 287 ntBASIC2.58□□□□□ -2
SEC61A1P61619 AL355877.2-201ENST00000603670 358 ntBASIC2.58□□□□□ -2
SEC61A1P61619 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
SEC61A1P61619 AC010889.1-201ENST00000566193 2666 ntBASIC2.58□□□□□ -2
SEC61A1P61619 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SEC61A1P61619 AC009487.2-201ENST00000420969 6821 ntBASIC2.57□□□□□ -2
SEC61A1P61619 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.57□□□□□ -2
SEC61A1P61619 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
SEC61A1P61619 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SEC61A1P61619 Y_RNA.405-201ENST00000383979 100 ntBASIC2.57□□□□□ -2
SEC61A1P61619 Y_RNA.451-201ENST00000384200 100 ntBASIC2.57□□□□□ -2
SEC61A1P61619 Y_RNA.524-201ENST00000384564 100 ntBASIC2.57□□□□□ -2
SEC61A1P61619 Y_RNA.561-201ENST00000384694 100 ntBASIC2.57□□□□□ -2
SEC61A1P61619 MIR544A-201ENST00000384855 91 ntBASIC2.57□□□□□ -2
SEC61A1P61619 RNU6-750P-201ENST00000390946 107 ntBASIC2.57□□□□□ -2
SEC61A1P61619 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.57□□□□□ -2
SEC61A1P61619 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.57□□□□□ -2
SEC61A1P61619 MTCYBP9-201ENST00000431021 303 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.57□□□□□ -2
SEC61A1P61619 AC124916.1-201ENST00000444020 547 ntBASIC2.57□□□□□ -2
SEC61A1P61619 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.57□□□□□ -2
SEC61A1P61619 AC006026.2-201ENST00000457376 180 ntBASIC2.57□□□□□ -2
SEC61A1P61619 RNU7-87P-201ENST00000459343 62 ntBASIC2.57□□□□□ -2
SEC61A1P61619 TOMM22P6-201ENST00000465035 409 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC010655.3-201ENST00000478818 450 ntBASIC2.57□□□□□ -2
SEC61A1P61619 RN7SL20P-201ENST00000488827 297 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.57□□□□□ -2
SEC61A1P61619 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.57□□□□□ -2
SEC61A1P61619 MRPS35P2-201ENST00000508242 191 ntBASIC2.57□□□□□ -2
SEC61A1P61619 ACA59.2-201ENST00000517061 156 ntBASIC2.57□□□□□ -2
SEC61A1P61619 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
SEC61A1P61619 AC040926.1-201ENST00000530195 238 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC022080.3-201ENST00000544433 482 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.57□□□□□ -2
SEC61A1P61619 AC025281.1-201ENST00000567026 265 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC060766.3-201ENST00000591442 263 ntBASIC2.57□□□□□ -2
SEC61A1P61619 AC091152.3-201ENST00000604227 325 ntBASIC2.57□□□□□ -2
SEC61A1P61619 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.57□□□□□ -2
SEC61A1P61619 UCA1.1-201ENST00000620952 75 ntBASIC2.57□□□□□ -2
SEC61A1P61619 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
SEC61A1P61619 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SEC61A1P61619 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEC61A1P61619 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SEC61A1P61619 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEC61A1P61619 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SEC61A1P61619 Y_RNA.210-201ENST00000364161 110 ntBASIC2.56□□□□□ -2
SEC61A1P61619 Y_RNA.358-201ENST00000365491 99 ntBASIC2.56□□□□□ -2
SEC61A1P61619 SNORD14.1-201ENST00000365609 90 ntBASIC2.56□□□□□ -2
SEC61A1P61619 SET-203ENST00000372688 801 ntTSL 2 BASIC2.56□□□□□ -2
SEC61A1P61619 SNORA12.2-201ENST00000391040 156 ntBASIC2.56□□□□□ -2
SEC61A1P61619 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SEC61A1P61619 UBA52P6-201ENST00000399822 382 ntBASIC2.56□□□□□ -2
SEC61A1P61619 RNU6-1140P-201ENST00000410517 106 ntBASIC2.56□□□□□ -2
SEC61A1P61619 RNU6-1245P-201ENST00000411130 106 ntBASIC2.56□□□□□ -2
SEC61A1P61619 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.56□□□□□ -2
SEC61A1P61619 S100A11P2-201ENST00000467589 312 ntBASIC2.56□□□□□ -2
SEC61A1P61619 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.56□□□□□ -2
SEC61A1P61619 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.56□□□□□ -2
SEC61A1P61619 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.56□□□□□ -2
SEC61A1P61619 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms