Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPS3AP61247 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPS3AP61247 SNORD62.1-201ENST00000362541 86 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 Y_RNA.111-201ENST00000363248 100 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 Y_RNA.151-201ENST00000363566 112 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 Y_RNA.301-201ENST00000364990 103 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 RNU6-790P-201ENST00000384479 105 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RPS3AP61247 AL360182.1-201ENST00000397433 468 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 MTCYBP2-201ENST00000407745 171 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 RNA5SP184-201ENST00000411071 108 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.46□□□□□ -2.02
RPS3AP61247 AC063976.3-201ENST00000426849 329 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.46□□□□□ -2.02
RPS3AP61247 AL139109.1-201ENST00000455491 297 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 MTCO2P30-201ENST00000503662 364 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 PTP4A1P4-201ENST00000512479 322 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 RNA5SP454-201ENST00000517231 127 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.46□□□□□ -2.02
RPS3AP61247 AC022616.8-201ENST00000533569 253 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.46□□□□□ -2.02
RPS3AP61247 CYP4A27P-201ENST00000567218 190 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.46□□□□□ -2.02
RPS3AP61247 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.46□□□□□ -2.02
RPS3AP61247 MIR4801-201ENST00000582704 82 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 AL078605.1-201ENST00000603529 500 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 AC063943.3-201ENST00000615562 356 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPS3AP61247 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPS3AP61247 CASC19-280ENST00000642102 1351 ntBASIC2.46□□□□□ -2.02
RPS3AP61247 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPS3AP61247 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPS3AP61247 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPS3AP61247 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 Y_RNA.123-201ENST00000363338 102 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RPS3AP61247 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.45□□□□□ -2.02
RPS3AP61247 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.45□□□□□ -2.02
RPS3AP61247 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.45□□□□□ -2.02
RPS3AP61247 RNU6-566P-201ENST00000516790 107 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 RNU6-1088P-201ENST00000516850 104 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 AC034114.1-201ENST00000520293 285 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.45□□□□□ -2.02
RPS3AP61247 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPS3AP61247 NDUFA5P6-201ENST00000542110 379 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.45□□□□□ -2.02
RPS3AP61247 MIR4742-201ENST00000581069 85 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 FGF7P1-201ENST00000582820 288 ntBASIC2.45□□□□□ -2.02
RPS3AP61247 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.45□□□□□ -2.02
RPS3AP61247 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
RPS3AP61247 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.45□□□□□ -2.02
RPS3AP61247 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.44□□□□□ -2.02
RPS3AP61247 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.44□□□□□ -2.02
RPS3AP61247 RNU1-91P-201ENST00000364746 163 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 U8.8-201ENST00000365399 135 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 SNORA36A-201ENST00000384221 132 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 RNU6-784P-201ENST00000384330 106 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 MIR517A-201ENST00000385001 87 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RPS3AP61247 RNA5SP210-201ENST00000391034 120 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 SNORA46.1-201ENST00000391069 153 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 RNA5SP201-201ENST00000410316 124 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 MTND3P8-201ENST00000412909 339 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AL139396.1-201ENST00000421137 167 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC012306.1-201ENST00000423267 114 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.44□□□□□ -2.02
RPS3AP61247 AL353572.1-201ENST00000442490 417 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 MTND1P17-201ENST00000448961 204 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 SNORD109B-201ENST00000458961 67 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 SNORD109A-201ENST00000459128 67 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC096725.1-201ENST00000514266 313 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC046134.1-201ENST00000514454 666 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.44□□□□□ -2.02
RPS3AP61247 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.44□□□□□ -2.02
RPS3AP61247 AP005639.2-201ENST00000527592 928 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.44□□□□□ -2.02
RPS3AP61247 AL033523.1-201ENST00000605153 153 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC124303.1-201ENST00000605703 360 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 SNORD14A-201ENST00000606526 91 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RPS3AP61247 MIR3976-201ENST00000606807 139 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AC019193.3-201ENST00000609144 554 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 AL161423.1-201ENST00000613700 262 ntBASIC2.44□□□□□ -2.02
RPS3AP61247 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
RPS3AP61247 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 SNORD32B-201ENST00000364460 84 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 RNU6-611P-201ENST00000384276 104 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 MIR196B-201ENST00000384852 84 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 MIR1294-201ENST00000408503 142 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.43□□□□□ -2.02
RPS3AP61247 ARL5AP4-201ENST00000430731 512 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms