Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC093027.1-201ENST00000546698 429 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.58□□□□□ -2
CLDN2P57739 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC021231.3-201ENST00000558497 370 ntBASIC2.58□□□□□ -2
CLDN2P57739 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC005899.2-201ENST00000584353 90 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC009229.3-201ENST00000608056 282 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC069294.1-201ENST00000608397 350 ntBASIC2.58□□□□□ -2
CLDN2P57739 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC107871.2-201ENST00000612894 502 ntBASIC2.58□□□□□ -2
CLDN2P57739 AC133104.2-201ENST00000615272 193 ntBASIC2.58□□□□□ -2
CLDN2P57739 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.58□□□□□ -2
CLDN2P57739 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.58□□□□□ -2
CLDN2P57739 AL669831.3-213ENST00000636676 183 ntBASIC2.58□□□□□ -2
CLDN2P57739 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN2P57739 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN2P57739 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.58□□□□□ -2
CLDN2P57739 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.57□□□□□ -2
CLDN2P57739 MTND5P9-201ENST00000503854 1755 ntBASIC2.57□□□□□ -2
CLDN2P57739 Y_RNA.40-201ENST00000362645 93 ntBASIC2.57□□□□□ -2
CLDN2P57739 RNU4-79P-201ENST00000362764 141 ntBASIC2.57□□□□□ -2
CLDN2P57739 Y_RNA.67-201ENST00000362870 100 ntBASIC2.57□□□□□ -2
CLDN2P57739 RNU6-1059P-201ENST00000363752 98 ntBASIC2.57□□□□□ -2
CLDN2P57739 Y_RNA.259-201ENST00000364619 101 ntBASIC2.57□□□□□ -2
CLDN2P57739 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.57□□□□□ -2
CLDN2P57739 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CLDN2P57739 Y_RNA.509-201ENST00000384506 99 ntBASIC2.57□□□□□ -2
CLDN2P57739 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
CLDN2P57739 CBX3P9-201ENST00000402326 552 ntBASIC2.57□□□□□ -2
CLDN2P57739 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.57□□□□□ -2
CLDN2P57739 USMG5P1-201ENST00000425964 177 ntBASIC2.57□□□□□ -2
CLDN2P57739 RPL30P4-201ENST00000429309 333 ntBASIC2.57□□□□□ -2
CLDN2P57739 Y_RNA.632-201ENST00000459189 102 ntBASIC2.57□□□□□ -2
CLDN2P57739 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.57□□□□□ -2
CLDN2P57739 AC091874.1-201ENST00000511402 339 ntBASIC2.57□□□□□ -2
CLDN2P57739 AC008549.1-201ENST00000512900 643 ntBASIC2.57□□□□□ -2
CLDN2P57739 SNORA25.11-201ENST00000515935 105 ntBASIC2.57□□□□□ -2
CLDN2P57739 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
CLDN2P57739 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.57□□□□□ -2
CLDN2P57739 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
CLDN2P57739 AC009318.2-201ENST00000610917 651 ntBASIC2.57□□□□□ -2
CLDN2P57739 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CLDN2P57739 MTND4P27-201ENST00000450813 1354 ntBASIC2.57□□□□□ -2
CLDN2P57739 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CLDN2P57739 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CLDN2P57739 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
CLDN2P57739 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.57□□□□□ -2
CLDN2P57739 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN2P57739 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.56□□□□□ -2
CLDN2P57739 SNORD50.1-201ENST00000362987 71 ntBASIC2.56□□□□□ -2
CLDN2P57739 U3.13-201ENST00000364804 214 ntBASIC2.56□□□□□ -2
CLDN2P57739 DYNLT3P1-201ENST00000378574 347 ntBASIC2.56□□□□□ -2
CLDN2P57739 RNU6-1286P-201ENST00000383871 107 ntBASIC2.56□□□□□ -2
CLDN2P57739 Y_RNA.504-201ENST00000384481 104 ntBASIC2.56□□□□□ -2
CLDN2P57739 RNY4P36-201ENST00000391116 96 ntBASIC2.56□□□□□ -2
CLDN2P57739 AC008267.5-201ENST00000424928 265 ntBASIC2.56□□□□□ -2
CLDN2P57739 GPM6BP3-201ENST00000442797 145 ntBASIC2.56□□□□□ -2
CLDN2P57739 AL513124.1-201ENST00000450410 614 ntBASIC2.56□□□□□ -2
CLDN2P57739 Y_RNA.653-201ENST00000459091 95 ntBASIC2.56□□□□□ -2
CLDN2P57739 SNORD19B-201ENST00000459623 84 ntBASIC2.56□□□□□ -2
CLDN2P57739 AC023141.11-201ENST00000508864 202 ntBASIC2.56□□□□□ -2
CLDN2P57739 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
CLDN2P57739 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
CLDN2P57739 RNU6-567P-201ENST00000516746 107 ntBASIC2.56□□□□□ -2
CLDN2P57739 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.56□□□□□ -2
CLDN2P57739 MIR5571-201ENST00000577998 113 ntBASIC2.56□□□□□ -2
CLDN2P57739 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
CLDN2P57739 AC116312.1-201ENST00000606841 314 ntBASIC2.56□□□□□ -2
CLDN2P57739 AL359198.2-201ENST00000611836 194 ntBASIC2.56□□□□□ -2
CLDN2P57739 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
CLDN2P57739 SNORA43.4-201ENST00000629559 138 ntBASIC2.56□□□□□ -2
CLDN2P57739 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
CLDN2P57739 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
CLDN2P57739 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
CLDN2P57739 Y_RNA.2-201ENST00000362330 96 ntBASIC2.55□□□□□ -2
CLDN2P57739 RNU4-56P-201ENST00000364700 142 ntBASIC2.55□□□□□ -2
CLDN2P57739 RNU6-968P-201ENST00000384076 107 ntBASIC2.55□□□□□ -2
CLDN2P57739 Y_RNA.490-201ENST00000384413 102 ntBASIC2.55□□□□□ -2
CLDN2P57739 MIR218-1-201ENST00000384999 110 ntBASIC2.55□□□□□ -2
CLDN2P57739 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.55□□□□□ -2
CLDN2P57739 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.55□□□□□ -2
CLDN2P57739 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.55□□□□□ -2
CLDN2P57739 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.55□□□□□ -2
CLDN2P57739 AC079354.2-201ENST00000453523 154 ntBASIC2.55□□□□□ -2
CLDN2P57739 RPL7P42-201ENST00000481005 679 ntBASIC2.55□□□□□ -2
CLDN2P57739 RPL23AP70-201ENST00000483361 460 ntBASIC2.55□□□□□ -2
CLDN2P57739 HMGB1P35-201ENST00000503360 598 ntBASIC2.55□□□□□ -2
CLDN2P57739 RNU5F-2P-201ENST00000516066 82 ntBASIC2.55□□□□□ -2
CLDN2P57739 RNA5SP76-201ENST00000516277 87 ntBASIC2.55□□□□□ -2
CLDN2P57739 RN7SKP282-201ENST00000516824 299 ntBASIC2.55□□□□□ -2
CLDN2P57739 Y_RNA.718-201ENST00000517110 102 ntBASIC2.55□□□□□ -2
CLDN2P57739 MIR5696-201ENST00000578474 85 ntBASIC2.55□□□□□ -2
CLDN2P57739 AC126177.8-201ENST00000618339 1015 ntBASIC2.55□□□□□ -2
CLDN2P57739 SNORD98-201ENST00000636377 67 ntBASIC2.55□□□□□ -2
CLDN2P57739 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CLDN2P57739 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
CLDN2P57739 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
CLDN2P57739 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
CLDN2P57739 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.54□□□□□ -2
CLDN2P57739 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms