Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-142P-201ENST00000384019 107 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 SNORA40.18-201ENST00000391200 128 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 RN7SKP61-201ENST00000410642 295 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AL590135.1-201ENST00000422215 156 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AL590556.1-201ENST00000423231 483 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC019205.3-201ENST00000424573 156 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 RPL23AP95-201ENST00000426806 265 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC244670.1-201ENST00000436879 112 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC016700.2-201ENST00000446011 156 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 RPS3AP17-201ENST00000472594 777 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC015911.1-201ENST00000495111 156 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC079140.5-201ENST00000507882 310 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AK3P2-201ENST00000507976 429 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC010493.1-201ENST00000513479 292 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 Y_RNA.688-201ENST00000516565 95 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AP005660.1-201ENST00000522972 293 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 BNIP3P25-201ENST00000596023 559 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AC007684.1-201ENST00000609671 477 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC068944.2-201ENST00000610373 403 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.62□□□□□ -2.15
PKNOX1P55347 AC009318.2-201ENST00000610917 651 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 U2.17-201ENST00000611454 95 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AL354950.2-201ENST00000617939 290 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 AL450472.1-202ENST00000637286 180 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PKNOX1P55347 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.61□□□□□ -2.15
PKNOX1P55347 Y_RNA.1-201ENST00000352915 104 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 RNU1-58P-201ENST00000362413 163 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 SNORA70B-201ENST00000384210 135 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PKNOX1P55347 RNU11-3P-201ENST00000391111 133 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 SNORA26.3-201ENST00000391119 136 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.61□□□□□ -2.15
PKNOX1P55347 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.61□□□□□ -2.15
PKNOX1P55347 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.61□□□□□ -2.15
PKNOX1P55347 VN1R108P-201ENST00000431580 830 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.61□□□□□ -2.15
PKNOX1P55347 AC069113.1-201ENST00000517763 267 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.61□□□□□ -2.15
PKNOX1P55347 HSPE1P4-201ENST00000550617 308 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.61□□□□□ -2.15
PKNOX1P55347 AC022254.1-201ENST00000567857 235 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 AP005136.1-201ENST00000579765 429 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 MIR3941-201ENST00000582572 103 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 MIR4713-201ENST00000582691 75 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 MIR3136-201ENST00000583498 78 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 RNU6-85P-201ENST00000605989 107 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 U1.36-201ENST00000620684 176 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.61□□□□□ -2.15
PKNOX1P55347 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.61□□□□□ -2.15
PKNOX1P55347 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
PKNOX1P55347 Y_RNA.255-201ENST00000364581 97 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 Y_RNA.296-201ENST00000364930 108 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PKNOX1P55347 RNY3P9-201ENST00000384727 106 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 Y_RNA.582-201ENST00000391023 95 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 MTCYBP2-201ENST00000407745 171 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 RNA5SP201-201ENST00000410316 124 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 RNA5SP501-201ENST00000410990 112 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.6□□□□□ -2.15
PKNOX1P55347 AL133396.1-201ENST00000432048 687 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AL606489.2-201ENST00000433886 234 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.6□□□□□ -2.15
PKNOX1P55347 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.6□□□□□ -2.15
PKNOX1P55347 MTCO2P18-201ENST00000457151 658 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 TRBV12-1-201ENST00000479785 344 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.6□□□□□ -2.15
PKNOX1P55347 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
PKNOX1P55347 SNORA40.12-201ENST00000516329 111 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.6□□□□□ -2.15
PKNOX1P55347 AC004223.2-201ENST00000590309 544 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AC078795.3-201ENST00000602913 472 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AC012507.3-201ENST00000603556 477 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AP001836.1-201ENST00000604675 523 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 RN7SKP299-201ENST00000606679 301 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AC097520.1-201ENST00000624435 385 ntBASIC1.6□□□□□ -2.15
PKNOX1P55347 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.6□□□□□ -2.15
PKNOX1P55347 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PKNOX1P55347 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.15
PKNOX1P55347 RNU6-1119P-201ENST00000384349 108 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 SNORD73A-201ENST00000386062 65 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 RNU4-55P-201ENST00000410731 137 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.59□□□□□ -2.15
PKNOX1P55347 UBE2V1P4-201ENST00000425374 344 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 AC078809.1-201ENST00000427601 140 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 RPL31P3-201ENST00000458430 332 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 UBL5P3-201ENST00000475112 231 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms