Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 HMGN2P35-201ENST00000412164 270 ntBASIC3.01□□□□□ -1.93
COPAP53621 AL445687.1-201ENST00000439946 251 ntBASIC3.01□□□□□ -1.93
COPAP53621 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.01□□□□□ -1.93
COPAP53621 AC011816.1-201ENST00000441346 546 ntBASIC3.01□□□□□ -1.93
COPAP53621 MTCYBP6-201ENST00000441810 138 ntBASIC3.01□□□□□ -1.93
COPAP53621 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.01□□□□□ -1.93
COPAP53621 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
COPAP53621 RPL22P13-201ENST00000493291 347 ntBASIC3.01□□□□□ -1.93
COPAP53621 AC083906.5-201ENST00000503722 328 ntBASIC3.01□□□□□ -1.93
COPAP53621 AC022493.2-201ENST00000506122 481 ntBASIC3.01□□□□□ -1.93
COPAP53621 SNORA25.11-201ENST00000515935 105 ntBASIC3.01□□□□□ -1.93
COPAP53621 RNA5SP356-201ENST00000515972 94 ntBASIC3.01□□□□□ -1.93
COPAP53621 SNRPGP18-201ENST00000553000 214 ntBASIC3.01□□□□□ -1.93
COPAP53621 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
COPAP53621 HMGB1P24-202ENST00000615653 685 ntBASIC3.01□□□□□ -1.93
COPAP53621 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
COPAP53621 MTND5P9-201ENST00000503854 1755 ntBASIC3.01□□□□□ -1.93
COPAP53621 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.01□□□□□ -1.93
COPAP53621 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
COPAP53621 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.01□□□□□ -1.93
COPAP53621 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 AL161431.1-201ENST00000618966 4205 ntBASIC3□□□□□ -1.93
COPAP53621 AC002543.1-201ENST00000299783 1954 ntBASIC3□□□□□ -1.93
COPAP53621 MTND5P30-201ENST00000452896 1731 ntBASIC3□□□□□ -1.93
COPAP53621 RNU6-212P-201ENST00000362642 104 ntBASIC3□□□□□ -1.93
COPAP53621 Y_RNA.48-201ENST00000362710 103 ntBASIC3□□□□□ -1.93
COPAP53621 RNU6-490P-201ENST00000362985 107 ntBASIC3□□□□□ -1.93
COPAP53621 U3.13-201ENST00000364804 214 ntBASIC3□□□□□ -1.93
COPAP53621 RNU6-474P-201ENST00000384243 107 ntBASIC3□□□□□ -1.93
COPAP53621 MIR559-201ENST00000385188 96 ntBASIC3□□□□□ -1.93
COPAP53621 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3□□□□□ -1.93
COPAP53621 NUP35P1-201ENST00000422734 947 ntBASIC3□□□□□ -1.93
COPAP53621 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3□□□□□ -1.93
COPAP53621 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3□□□□□ -1.93
COPAP53621 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3□□□□□ -1.93
COPAP53621 AC068781.1-201ENST00000488231 618 ntBASIC3□□□□□ -1.93
COPAP53621 RN7SL20P-201ENST00000488827 297 ntBASIC3□□□□□ -1.93
COPAP53621 AC090096.1-201ENST00000489168 390 ntBASIC3□□□□□ -1.93
COPAP53621 SCARNA11.3-201ENST00000517276 130 ntBASIC3□□□□□ -1.93
COPAP53621 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3□□□□□ -1.93
COPAP53621 AP003072.1-201ENST00000531740 145 ntBASIC3□□□□□ -1.93
COPAP53621 CBX3P8-201ENST00000532412 525 ntBASIC3□□□□□ -1.93
COPAP53621 AC007375.1-201ENST00000554513 578 ntBASIC3□□□□□ -1.93
COPAP53621 AC020661.2-201ENST00000560114 134 ntBASIC3□□□□□ -1.93
COPAP53621 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3□□□□□ -1.93
COPAP53621 MIR3171-201ENST00000584270 74 ntBASIC3□□□□□ -1.93
COPAP53621 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 RPL12P50-201ENST00000603116 116 ntBASIC3□□□□□ -1.93
COPAP53621 AL356157.2-201ENST00000605122 111 ntBASIC3□□□□□ -1.93
COPAP53621 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
COPAP53621 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3□□□□□ -1.93
COPAP53621 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
COPAP53621 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.99□□□□□ -1.93
COPAP53621 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COPAP53621 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
COPAP53621 RNU6-1010P-201ENST00000362757 107 ntBASIC2.99□□□□□ -1.93
COPAP53621 RNU6-1141P-201ENST00000364520 107 ntBASIC2.99□□□□□ -1.93
COPAP53621 SNORD32A-201ENST00000364805 84 ntBASIC2.99□□□□□ -1.93
COPAP53621 RNU6-784P-201ENST00000384330 106 ntBASIC2.99□□□□□ -1.93
COPAP53621 RNU2-23P-201ENST00000410545 195 ntBASIC2.99□□□□□ -1.93
COPAP53621 AL353997.1-201ENST00000432936 108 ntBASIC2.99□□□□□ -1.93
COPAP53621 RNA5SP367-201ENST00000516557 118 ntBASIC2.99□□□□□ -1.93
COPAP53621 HSPE1P4-201ENST00000550617 308 ntBASIC2.99□□□□□ -1.93
COPAP53621 ANP32BP3-201ENST00000559213 706 ntBASIC2.99□□□□□ -1.93
COPAP53621 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.99□□□□□ -1.93
COPAP53621 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.99□□□□□ -1.93
COPAP53621 MIR3117-201ENST00000584034 78 ntBASIC2.99□□□□□ -1.93
COPAP53621 MIR4298-201ENST00000584380 73 ntBASIC2.99□□□□□ -1.93
COPAP53621 Y_RNA.812-201ENST00000610788 101 ntBASIC2.99□□□□□ -1.93
COPAP53621 Y_RNA.784-201ENST00000613803 101 ntBASIC2.99□□□□□ -1.93
COPAP53621 Y_RNA.787-201ENST00000616522 101 ntBASIC2.99□□□□□ -1.93
COPAP53621 Y_RNA.780-201ENST00000617336 101 ntBASIC2.99□□□□□ -1.93
COPAP53621 Y_RNA.801-201ENST00000619005 101 ntBASIC2.99□□□□□ -1.93
COPAP53621 uc_338.22-201ENST00000622722 187 ntBASIC2.99□□□□□ -1.93
COPAP53621 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COPAP53621 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.99□□□□□ -1.93
COPAP53621 Z75746.1-201ENST00000440243 2080 ntBASIC2.99□□□□□ -1.93
COPAP53621 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COPAP53621 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COPAP53621 ZNF299P-201ENST00000406845 1804 ntBASIC2.98□□□□□ -1.93
COPAP53621 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.98□□□□□ -1.93
COPAP53621 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COPAP53621 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.98□□□□□ -1.93
COPAP53621 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COPAP53621 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
COPAP53621 RNU6-1115P-201ENST00000362490 106 ntBASIC2.98□□□□□ -1.93
COPAP53621 Y_RNA.533-201ENST00000384596 114 ntBASIC2.98□□□□□ -1.93
COPAP53621 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
COPAP53621 SNORD88.1-201ENST00000408684 91 ntBASIC2.98□□□□□ -1.93
COPAP53621 AC097463.2-201ENST00000421074 142 ntBASIC2.98□□□□□ -1.93
COPAP53621 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.98□□□□□ -1.93
COPAP53621 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.98□□□□□ -1.93
COPAP53621 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.98□□□□□ -1.93
COPAP53621 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.98□□□□□ -1.93
COPAP53621 RPL17P19-201ENST00000489069 552 ntBASIC2.98□□□□□ -1.93
COPAP53621 AC022447.4-201ENST00000504053 364 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms