Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC069257.2-201ENST00000441819 155 ntBASIC0.55□□□□□ -2.32
NUP98P52948 MTCO3P9-201ENST00000506989 781 ntBASIC0.55□□□□□ -2.32
NUP98P52948 PSMC1P5-201ENST00000512850 177 ntBASIC0.55□□□□□ -2.32
NUP98P52948 ACA64.5-201ENST00000516207 127 ntBASIC0.55□□□□□ -2.32
NUP98P52948 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
NUP98P52948 RNA5SP481-201ENST00000516814 122 ntBASIC0.55□□□□□ -2.32
NUP98P52948 AC026616.1-201ENST00000523157 525 ntBASIC0.55□□□□□ -2.32
NUP98P52948 AC068790.6-201ENST00000602558 258 ntBASIC0.55□□□□□ -2.32
NUP98P52948 AC073544.1-201ENST00000600110 1595 ntBASIC0.55□□□□□ -2.32
NUP98P52948 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NUP98P52948 RNU5A-8P-201ENST00000364102 114 ntBASIC0.54□□□□□ -2.32
NUP98P52948 MRPL35P1-201ENST00000404272 572 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.54□□□□□ -2.32
NUP98P52948 MTCO2P1-201ENST00000424648 477 ntBASIC0.54□□□□□ -2.32
NUP98P52948 MTND1P30-201ENST00000441241 901 ntBASIC0.54□□□□□ -2.32
NUP98P52948 RPS26P45-201ENST00000471748 340 ntBASIC0.54□□□□□ -2.32
NUP98P52948 TRBVA-201ENST00000498804 316 ntBASIC0.54□□□□□ -2.32
NUP98P52948 RNU6-914P-201ENST00000516749 109 ntBASIC0.54□□□□□ -2.32
NUP98P52948 RNU6-677P-201ENST00000516914 101 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AC136628.3-201ENST00000521868 290 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.54□□□□□ -2.32
NUP98P52948 AL391001.1-201ENST00000602747 715 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AC018889.1-201ENST00000605372 397 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AL021879.1-201ENST00000611756 288 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AL159152.1-201ENST00000635019 2587 ntBASIC0.54□□□□□ -2.32
NUP98P52948 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.54□□□□□ -2.32
NUP98P52948 RNU6-946P-201ENST00000383878 107 ntBASIC0.54□□□□□ -2.32
NUP98P52948 MIR544A-201ENST00000384855 91 ntBASIC0.54□□□□□ -2.32
NUP98P52948 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.54□□□□□ -2.32
NUP98P52948 AL669831.1-202ENST00000428504 417 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.54□□□□□ -2.32
NUP98P52948 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.54□□□□□ -2.32
NUP98P52948 RNU2-10P-201ENST00000516375 211 ntBASIC0.54□□□□□ -2.32
NUP98P52948 RNU11-2P-201ENST00000516898 142 ntBASIC0.54□□□□□ -2.32
NUP98P52948 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
NUP98P52948 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.54□□□□□ -2.32
NUP98P52948 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.54□□□□□ -2.32
NUP98P52948 AC009712.1-201ENST00000564938 316 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AC005776.1-201ENST00000603164 290 ntBASIC0.54□□□□□ -2.32
NUP98P52948 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AP002802.2-201ENST00000605877 235 ntBASIC0.54□□□□□ -2.32
NUP98P52948 AC004492.1-201ENST00000607036 742 ntBASIC0.54□□□□□ -2.32
NUP98P52948 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.54□□□□□ -2.32
NUP98P52948 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.54□□□□□ -2.32
NUP98P52948 MIR100-201ENST00000385259 80 ntBASIC0.53□□□□□ -2.32
NUP98P52948 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
NUP98P52948 ELOCP17-201ENST00000414751 326 ntBASIC0.53□□□□□ -2.32
NUP98P52948 ELOCP9-201ENST00000418624 239 ntBASIC0.53□□□□□ -2.32
NUP98P52948 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.53□□□□□ -2.32
NUP98P52948 PRPS1P1-201ENST00000445305 876 ntBASIC0.53□□□□□ -2.32
NUP98P52948 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.53□□□□□ -2.32
NUP98P52948 MTCO3P27-201ENST00000514397 196 ntBASIC0.53□□□□□ -2.32
NUP98P52948 RNA5SP337-201ENST00000517007 109 ntBASIC0.53□□□□□ -2.32
NUP98P52948 AL442163.3-201ENST00000554110 156 ntBASIC0.53□□□□□ -2.32
NUP98P52948 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.53□□□□□ -2.32
NUP98P52948 AL354696.1-201ENST00000614652 497 ntBASIC0.53□□□□□ -2.32
NUP98P52948 SNORA75B-201ENST00000384053 137 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RNU6-1065P-201ENST00000384513 106 ntBASIC0.52□□□□□ -2.33
NUP98P52948 ARL5AP1-201ENST00000418991 388 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC006366.1-201ENST00000422002 759 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RPL23AP30-201ENST00000432419 501 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AP000542.1-201ENST00000448473 371 ntBASIC0.52□□□□□ -2.33
NUP98P52948 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AK3P2-201ENST00000507976 429 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RNU6-322P-201ENST00000516010 103 ntBASIC0.52□□□□□ -2.33
NUP98P52948 SNORA31.4-201ENST00000516049 129 ntBASIC0.52□□□□□ -2.33
NUP98P52948 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC091163.3-201ENST00000518269 1144 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.52□□□□□ -2.33
NUP98P52948 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.52□□□□□ -2.33
NUP98P52948 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.52□□□□□ -2.33
NUP98P52948 CYP4A27P-201ENST00000567218 190 ntBASIC0.52□□□□□ -2.33
NUP98P52948 MIR3664-201ENST00000579074 99 ntBASIC0.52□□□□□ -2.33
NUP98P52948 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.52□□□□□ -2.33
NUP98P52948 MTCO2P2-201ENST00000591258 225 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC024940.5-201ENST00000622889 474 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AP000943.4-201ENST00000622912 357 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.52□□□□□ -2.33
NUP98P52948 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.52□□□□□ -2.33
NUP98P52948 RNU6-1285P-201ENST00000363480 105 ntBASIC0.52□□□□□ -2.33
NUP98P52948 SNORA63D-201ENST00000364359 132 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RNU6-142P-201ENST00000384019 107 ntBASIC0.52□□□□□ -2.33
NUP98P52948 PIGPP2-201ENST00000411569 458 ntBASIC0.52□□□□□ -2.33
NUP98P52948 COX6CP10-201ENST00000416832 224 ntBASIC0.52□□□□□ -2.33
NUP98P52948 VPS26BP1-201ENST00000417155 755 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RPS20P10-201ENST00000451209 253 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.52□□□□□ -2.33
NUP98P52948 AC074344.1-201ENST00000512823 224 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RNA5SP503-201ENST00000517047 117 ntBASIC0.52□□□□□ -2.33
NUP98P52948 RNA5SP437-201ENST00000517249 129 ntBASIC0.52□□□□□ -2.33
NUP98P52948 SUMO2P16-201ENST00000519475 264 ntBASIC0.52□□□□□ -2.33
NUP98P52948 MIR3976-201ENST00000606807 139 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC068880.4-201ENST00000623082 495 ntBASIC0.52□□□□□ -2.33
NUP98P52948 AC092104.1-201ENST00000497346 1441 ntBASIC0.51□□□□□ -2.33
NUP98P52948 RNU6-462P-201ENST00000362659 105 ntBASIC0.51□□□□□ -2.33
NUP98P52948 SNORD56.1-201ENST00000362913 68 ntBASIC0.51□□□□□ -2.33
NUP98P52948 SNORA4.1-201ENST00000364263 144 ntBASIC0.51□□□□□ -2.33
NUP98P52948 Y_RNA.294-201ENST00000364916 102 ntBASIC0.51□□□□□ -2.33
NUP98P52948 RNU2-70P-201ENST00000410718 179 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms