Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU2-9P-201ENST00000410194 145 ntBASIC1.66□□□□□ -2.14
CASP4P49662 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.66□□□□□ -2.14
CASP4P49662 MTATP6P18-201ENST00000417994 673 ntBASIC1.66□□□□□ -2.14
CASP4P49662 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.66□□□□□ -2.14
CASP4P49662 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.66□□□□□ -2.14
CASP4P49662 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.66□□□□□ -2.14
CASP4P49662 SCARNA18-201ENST00000459004 134 ntBASIC1.66□□□□□ -2.14
CASP4P49662 RNU6-333P-201ENST00000459117 107 ntBASIC1.66□□□□□ -2.14
CASP4P49662 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.66□□□□□ -2.14
CASP4P49662 AC108210.2-201ENST00000503681 201 ntBASIC1.66□□□□□ -2.14
CASP4P49662 AC009646.1-201ENST00000510455 318 ntBASIC1.66□□□□□ -2.14
CASP4P49662 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.66□□□□□ -2.14
CASP4P49662 AC069113.1-201ENST00000517763 267 ntBASIC1.66□□□□□ -2.14
CASP4P49662 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.66□□□□□ -2.14
CASP4P49662 OSBPL9P5-201ENST00000542581 171 ntBASIC1.66□□□□□ -2.14
CASP4P49662 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.66□□□□□ -2.14
CASP4P49662 DEFB122-202ENST00000569013 197 ntBASIC1.66□□□□□ -2.14
CASP4P49662 RSL24D1P11-201ENST00000591045 491 ntBASIC1.66□□□□□ -2.14
CASP4P49662 AC123912.5-201ENST00000605470 343 ntBASIC1.66□□□□□ -2.14
CASP4P49662 uc_338.5-201ENST00000611839 155 ntBASIC1.66□□□□□ -2.14
CASP4P49662 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
CASP4P49662 MIR1248-201ENST00000629190 106 ntBASIC1.66□□□□□ -2.14
CASP4P49662 SNORD98-201ENST00000636377 67 ntBASIC1.66□□□□□ -2.14
CASP4P49662 ZNF680P1-201ENST00000436625 1469 ntBASIC1.66□□□□□ -2.14
CASP4P49662 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CASP4P49662 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CASP4P49662 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CASP4P49662 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
CASP4P49662 MTND4P14-201ENST00000435799 1354 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RNU6-457P-201ENST00000363999 107 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RNU4-13P-201ENST00000364019 141 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RNU6-336P-201ENST00000364891 107 ntBASIC1.65□□□□□ -2.15
CASP4P49662 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CASP4P49662 Y_RNA.399-201ENST00000383955 105 ntBASIC1.65□□□□□ -2.15
CASP4P49662 MIR597-201ENST00000384968 97 ntBASIC1.65□□□□□ -2.15
CASP4P49662 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
CASP4P49662 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RPS20P15-201ENST00000412792 311 ntBASIC1.65□□□□□ -2.15
CASP4P49662 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.65□□□□□ -2.15
CASP4P49662 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.65□□□□□ -2.15
CASP4P49662 USP9YP29-201ENST00000445112 563 ntBASIC1.65□□□□□ -2.15
CASP4P49662 SNRPFP3-201ENST00000457792 225 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RNA5SP57-201ENST00000459463 123 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC027575.1-201ENST00000481064 460 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC098862.1-201ENST00000504991 413 ntBASIC1.65□□□□□ -2.15
CASP4P49662 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
CASP4P49662 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.65□□□□□ -2.15
CASP4P49662 RNU6-991P-201ENST00000516168 107 ntBASIC1.65□□□□□ -2.15
CASP4P49662 RN7SKP219-201ENST00000516825 296 ntBASIC1.65□□□□□ -2.15
CASP4P49662 SNORA25.17-201ENST00000517184 124 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC015720.1-201ENST00000565251 277 ntBASIC1.65□□□□□ -2.15
CASP4P49662 MIR4528-201ENST00000577763 90 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC008536.2-201ENST00000607284 349 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC130454.1-201ENST00000622948 401 ntBASIC1.65□□□□□ -2.15
CASP4P49662 AC005609.4-201ENST00000625071 447 ntBASIC1.65□□□□□ -2.15
CASP4P49662 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CASP4P49662 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
CASP4P49662 CBX3P1-201ENST00000325243 554 ntBASIC1.64□□□□□ -2.15
CASP4P49662 RNU6-266P-201ENST00000364225 107 ntBASIC1.64□□□□□ -2.15
CASP4P49662 SNORD32B-201ENST00000364460 84 ntBASIC1.64□□□□□ -2.15
CASP4P49662 RNU6-43P-201ENST00000384302 107 ntBASIC1.64□□□□□ -2.15
CASP4P49662 RPS29P13-201ENST00000402041 169 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AL117339.3-201ENST00000418733 162 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.64□□□□□ -2.15
CASP4P49662 MTCO2P34-201ENST00000421994 607 ntBASIC1.64□□□□□ -2.15
CASP4P49662 CETN4P-201ENST00000432407 469 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC244670.1-201ENST00000436879 112 ntBASIC1.64□□□□□ -2.15
CASP4P49662 HSPE1P21-201ENST00000438283 308 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.64□□□□□ -2.15
CASP4P49662 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.64□□□□□ -2.15
CASP4P49662 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC010493.1-201ENST00000513479 292 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.64□□□□□ -2.15
CASP4P49662 AL137161.1-201ENST00000532231 390 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC022880.1-201ENST00000534017 973 ntBASIC1.64□□□□□ -2.15
CASP4P49662 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.64□□□□□ -2.15
CASP4P49662 AC022254.1-201ENST00000567857 235 ntBASIC1.64□□□□□ -2.15
CASP4P49662 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
CASP4P49662 Z99497.2-201ENST00000603634 310 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC107304.1-201ENST00000604229 296 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC002044.1-201ENST00000606707 158 ntBASIC1.64□□□□□ -2.15
CASP4P49662 AC104073.3-201ENST00000610942 955 ntBASIC1.64□□□□□ -2.15
CASP4P49662 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CASP4P49662 AC092268.1-201ENST00000342691 405 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU4-15P-201ENST00000362613 141 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU6-552P-201ENST00000362869 119 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU6-428P-201ENST00000362942 107 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
CASP4P49662 Y_RNA.159-201ENST00000363674 87 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU6-60P-201ENST00000364792 103 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU6-517P-201ENST00000384362 110 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RN7SKP61-201ENST00000410642 295 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNA5SP501-201ENST00000410990 112 ntBASIC1.63□□□□□ -2.15
CASP4P49662 AC078809.1-201ENST00000427601 140 ntBASIC1.63□□□□□ -2.15
CASP4P49662 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.63□□□□□ -2.15
CASP4P49662 AL035666.1-201ENST00000446195 348 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU6-956P-201ENST00000458868 103 ntBASIC1.63□□□□□ -2.15
CASP4P49662 RNU7-167P-201ENST00000459160 62 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms