Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-1210P-201ENST00000363775 107 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 RNU6-393P-201ENST00000384475 107 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 RNU6-1127P-201ENST00000384580 107 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 Y_RNA.553-201ENST00000384670 102 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 SNORA16.2-201ENST00000390991 127 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC068050.1-201ENST00000394891 380 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 CBX3P9-201ENST00000402326 552 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 MTATP6P18-201ENST00000417994 673 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AL591043.1-201ENST00000432461 424 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.47□□□□□ -2.17
CXCL12P48061 PRPS1P1-201ENST00000445305 876 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC098826.2-201ENST00000452011 651 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 SCARNA18-201ENST00000459004 134 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 snoU13.14-201ENST00000459372 104 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.47□□□□□ -2.17
CXCL12P48061 RNU2-69P-201ENST00000516061 100 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC034114.1-201ENST00000520293 285 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL12P48061 AP003392.2-201ENST00000527269 208 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.47□□□□□ -2.17
CXCL12P48061 AP005435.4-201ENST00000529514 284 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AL356057.1-201ENST00000533798 831 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 MIR3122-201ENST00000577243 73 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.47□□□□□ -2.17
CXCL12P48061 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL12P48061 MTATP6P3-201ENST00000581686 676 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC123912.5-201ENST00000605470 343 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 AC008536.2-201ENST00000607284 349 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 Z82243.1-201ENST00000609432 473 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CXCL12P48061 AL159153.1-201ENST00000619688 317 ntBASIC1.47□□□□□ -2.17
CXCL12P48061 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CXCL12P48061 AP000560.1-201ENST00000624150 1937 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 snoU2_19.1-201ENST00000362361 80 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 RNU6-1120P-201ENST00000362988 108 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 RNU6-944P-201ENST00000364023 107 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 U3.13-201ENST00000364804 214 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 Y_RNA.359-201ENST00000365498 102 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL12P48061 MIR544A-201ENST00000384855 91 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 RNU2-48P-201ENST00000410694 191 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 MTCO2P16-201ENST00000436962 677 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AL353689.1-201ENST00000438895 199 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 RPL39P29-201ENST00000447779 157 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AL122001.1-201ENST00000457027 370 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.46□□□□□ -2.18
CXCL12P48061 AC010424.1-201ENST00000506336 297 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL12P48061 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL12P48061 RNU6-667P-201ENST00000517186 102 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.46□□□□□ -2.18
CXCL12P48061 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL12P48061 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AC006362.1-201ENST00000567392 174 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 MIR5583-1-201ENST00000580941 59 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AL031274.2-201ENST00000599419 203 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 uc_338.11-201ENST00000619132 160 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AC007792.1-201ENST00000623023 402 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 AC022418.1-201ENST00000624118 445 ntBASIC1.46□□□□□ -2.18
CXCL12P48061 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.46□□□□□ -2.18
CXCL12P48061 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.45□□□□□ -2.18
CXCL12P48061 RNU6-428P-201ENST00000362942 107 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 Y_RNA.77-201ENST00000362962 107 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RNU6-105P-201ENST00000363909 104 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 Y_RNA.381-201ENST00000365666 102 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RNU6-434P-201ENST00000384376 107 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RNY3P9-201ENST00000384727 106 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 MIR7-2-201ENST00000384970 110 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RNU2-32P-201ENST00000411193 191 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.45□□□□□ -2.18
CXCL12P48061 MTCYBP8-201ENST00000422855 651 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC107032.1-201ENST00000485945 480 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RPL30P1-201ENST00000488676 339 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.45□□□□□ -2.18
CXCL12P48061 LRRC34P2-201ENST00000514850 553 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 Y_RNA.688-201ENST00000516565 95 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RNA5SP137-201ENST00000516833 135 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL12P48061 CYCSP27-201ENST00000527643 293 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC023050.3-201ENST00000541142 333 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.45□□□□□ -2.18
CXCL12P48061 AGGF1P4-201ENST00000568249 801 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AP005136.1-201ENST00000579765 429 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 RSL24D1P11-201ENST00000591045 491 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.45□□□□□ -2.18
CXCL12P48061 AL391646.1-201ENST00000603860 190 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC002044.1-201ENST00000606707 158 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC004908.3-201ENST00000610248 625 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC104073.3-201ENST00000610942 955 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC063943.3-201ENST00000615562 356 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 AC009509.4-201ENST00000619202 509 ntBASIC1.45□□□□□ -2.18
CXCL12P48061 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL12P48061 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CXCL12P48061 U8.1-201ENST00000362843 134 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 RNU6-552P-201ENST00000362869 119 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 RNU6-903P-201ENST00000391270 109 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 HMGN2P39-201ENST00000398005 273 ntBASIC1.44□□□□□ -2.18
CXCL12P48061 RNU2-29P-201ENST00000410423 189 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms