Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-827P-201ENST00000365553 106 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 RNU6-128P-201ENST00000383976 107 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 RNU6-214P-201ENST00000384130 107 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 MIR450B-201ENST00000401182 78 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AL133475.1-201ENST00000404414 305 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.21□□□□□ -2.06
NEDD4P46934 AC007969.2-201ENST00000441891 191 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AL031274.1-201ENST00000450334 232 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.21□□□□□ -2.06
NEDD4P46934 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.21□□□□□ -2.06
NEDD4P46934 AC112771.1-201ENST00000463581 102 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC023141.11-201ENST00000508864 202 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 FAM206BP-201ENST00000510179 541 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.21□□□□□ -2.06
NEDD4P46934 AF235103.2-201ENST00000525753 346 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AP000763.2-201ENST00000540641 163 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC069294.1-201ENST00000608397 350 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC006504.8-201ENST00000621046 635 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 MTND4P1-201ENST00000457501 1466 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 AC002543.1-201ENST00000299783 1954 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NEDD4P46934 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NEDD4P46934 RPS15AP10-201ENST00000432472 382 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.2□□□□□ -2.06
NEDD4P46934 NFU1P2-201ENST00000448700 469 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 RNU6-1037P-201ENST00000459571 107 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 MTCYBP18-201ENST00000501056 747 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 AK3P2-201ENST00000507976 429 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 RNU6-358P-201ENST00000516564 75 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.2□□□□□ -2.06
NEDD4P46934 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.2□□□□□ -2.06
NEDD4P46934 MIR3199-1-201ENST00000582434 88 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 AL356157.2-201ENST00000605122 111 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 uc_338.15-201ENST00000615470 191 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 AC241585.2-209ENST00000638217 143 ntBASIC2.2□□□□□ -2.06
NEDD4P46934 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NEDD4P46934 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
NEDD4P46934 RNU6-336P-201ENST00000364891 107 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 RNU6-1329P-201ENST00000365664 107 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 RNU6-1222P-201ENST00000384615 107 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 SUMO2P12-201ENST00000405924 140 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 RNU2-23P-201ENST00000410545 195 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 RNU6-293P-201ENST00000411259 106 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 UBE2V1P4-201ENST00000425374 344 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.19□□□□□ -2.06
NEDD4P46934 RPL7P12-201ENST00000446719 750 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.19□□□□□ -2.06
NEDD4P46934 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.19□□□□□ -2.06
NEDD4P46934 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.19□□□□□ -2.06
NEDD4P46934 AC090096.1-201ENST00000489168 390 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.19□□□□□ -2.06
NEDD4P46934 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.19□□□□□ -2.06
NEDD4P46934 AC073410.2-201ENST00000603240 332 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 BNIP3P10-201ENST00000605360 577 ntBASIC2.19□□□□□ -2.06
NEDD4P46934 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NEDD4P46934 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NEDD4P46934 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NEDD4P46934 RNU6-428P-201ENST00000362942 107 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 RNU6-529P-201ENST00000363383 104 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
NEDD4P46934 Y_RNA.414-201ENST00000384011 101 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 RNU1-57P-201ENST00000384491 166 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 CYCSP48-201ENST00000417124 323 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
NEDD4P46934 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.18□□□□□ -2.06
NEDD4P46934 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.18□□□□□ -2.06
NEDD4P46934 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.18□□□□□ -2.06
NEDD4P46934 snoU13.14-201ENST00000459372 104 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 RNU6-1314P-201ENST00000517139 104 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 RN7SKP256-201ENST00000517201 314 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.18□□□□□ -2.06
NEDD4P46934 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.18□□□□□ -2.06
NEDD4P46934 AP005597.4-201ENST00000526762 229 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AC025423.5-201ENST00000550230 219 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AC103996.1-201ENST00000555468 102 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.18□□□□□ -2.06
NEDD4P46934 AC105245.1-201ENST00000581934 244 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AC068944.2-201ENST00000610373 403 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
NEDD4P46934 FAM157A-202ENST00000615155 405 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AC100810.6-201ENST00000638068 285 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 AC135776.4-201ENST00000624300 1904 ntBASIC2.18□□□□□ -2.06
NEDD4P46934 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NEDD4P46934 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NEDD4P46934 MIR186-201ENST00000384988 86 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 EIF4EP4-201ENST00000424916 578 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 MTND1P2-201ENST00000430604 821 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 AL645568.3-201ENST00000433683 316 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 MTCO3P18-201ENST00000440206 761 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 AC243964.1-201ENST00000441814 261 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 RPL39P29-201ENST00000447779 157 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 RPL31P58-201ENST00000469001 379 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 AC008628.2-201ENST00000502605 298 ntBASIC2.17□□□□□ -2.06
NEDD4P46934 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.17□□□□□ -2.06
NEDD4P46934 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms